March 2009 Archives by subject
Starting: Sun Mar 1 23:06:22 UTC 2009
Ending: Tue Mar 31 22:59:45 UTC 2009
Messages: 269
- [Bioperl-l] 2009 GMOD Summer Schools - Americas & Europe
Dave Clements
- [Bioperl-l] 2009 GMOD Summer Schools - Americas & Europe
Dave Clements
- [Bioperl-l] :DB::SeqFeature oddities
Cook, Malcolm
- [Bioperl-l] [Bioperl-guts-l] [Bug 2789] Script submission: reverse translate Profam motifs
Brian Osborne
- [Bioperl-l] [BioSQL-l] OBF application for Summer of Code has been rejected
Chris Fields
- [Bioperl-l] [BioSQL-l] OBF application for Summer of Code has been rejected
Hilmar Lapp
- [Bioperl-l] Bio::AnnotatableI function annotation()
Govind Chandra
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Govind Chandra
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Hilmar Lapp
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Chris Fields
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Hilmar Lapp
- [Bioperl-l] Bio::AnnotatableI function annotation()
Hilmar Lapp
- [Bioperl-l] Bio::AnnotatableI function annotation()
Hilmar Lapp
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Govind Chandra
- [Bioperl-l] Bio::AnnotatableI function annotation()
Mark A. Jensen
- [Bioperl-l] Bio::AnnotatableI function annotation()
Brian Osborne
- [Bioperl-l] Bio::DB::GFF again
Alper Yilmaz
- [Bioperl-l] Bio::DB::GFF again
Aaron Mackey
- [Bioperl-l] Bio::DB::SeqFeature oddities
Blanchette, Marco
- [Bioperl-l] Bio::Location::{Simple,Fuzzy} and "IN-BETWEEN"
George Hartzell
- [Bioperl-l] Bio::Location::{Simple,Fuzzy} and "IN-BETWEEN"
Chris Fields
- [Bioperl-l] Bio::Location::{Simple,Fuzzy} and "IN-BETWEEN"
Heikki Lehvaslaiho
- [Bioperl-l] Bio::Location::{Simple,Fuzzy} and "IN-BETWEEN"
George Hartzell
- [Bioperl-l] bioperl-dev goes live!
Mark A. Jensen
- [Bioperl-l] bioperl-dev goes live!
Chris Fields
- [Bioperl-l] bioperl-dev goes live!
Mark A. Jensen
- [Bioperl-l] bioperl-dev goes live!
Mark A. Jensen
- [Bioperl-l] Bioperl-l Digest, Vol 71, Issue 11
Sanjay Harke
- [Bioperl-l] Bioperl-l Digest, Vol 71, Issue 15
Govind Chandra
- [Bioperl-l] Bioperl-l Digest, Vol 71, Issue 15
Mark A. Jensen
- [Bioperl-l] Bioperl-l Digest, Vol 71, Issue 15
demis001
- [Bioperl-l] Bioperl-l Digest, Vol 71, Issue 6
Sanjay Harke
- [Bioperl-l] bioperl-run version
Koen van der Drift
- [Bioperl-l] bioperl-run version
Chris Fields
- [Bioperl-l] bioperl.org (and open-bio.org) websites down?
Scott Cain
- [Bioperl-l] bl2seq
shweta kagliwal
- [Bioperl-l] bl2seq
Mark A. Jensen
- [Bioperl-l] bl2seq
Mark A. Jensen
- [Bioperl-l] bl2seq
Mark A. Jensen
- [Bioperl-l] BLAST + BioPerl
Jason Stajich
- [Bioperl-l] CGI and BioPerl Re: Bioperl-l Digest, Vol 71, Issue 6
Chris Fields
- [Bioperl-l] CGI and BioPerl Re: Bioperl-l Digest, Vol 71, Issue 6
Chris Fields
- [Bioperl-l] Consulting project
Boris Umylny
- [Bioperl-l] CPAN module?
Mark A. Jensen
- [Bioperl-l] Degenerate primer calculation
Bruno Vecchi
- [Bioperl-l] Degenerate primer calculation
Heikki Lehvaslaiho
- [Bioperl-l] Emboss factory script
shweta kagliwal
- [Bioperl-l] Emboss factory script
Scott Markel
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Jens Lichtenberg
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Dave Messina
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Jens Lichtenberg
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Dave Messina
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Hilmar Lapp
- [Bioperl-l] Extraction of exon, intron, promoter, UTR
Chris Fields
- [Bioperl-l] fit genomic coordinates
Laurent Manchon
- [Bioperl-l] Fwd: How to run this "bp_search2gff.pl"
Jason Stajich
- [Bioperl-l] Fwd: [blast-help] Fwd: Question about the definition of 'gaps' in blast -m8 output...
Chris Fields
- [Bioperl-l] Fwd: [blast-help] Fwd: Question about the definition of 'gaps' in blast -m8 output...
Dan Bolser
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Hilmar Lapp
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Chris Fields
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Isabelle Phan
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
iphan
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Chris Fields
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Isabelle Phan
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Hilmar Lapp
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Chris Fields
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
iphan
- [Bioperl-l] Fwd: [Gmod-ajax] Jbrowse on mac os 10.5
Chris Fields
- [Bioperl-l] Gene name to Accession id
gopu_36
- [Bioperl-l] Gene name to Accession id
Smithies, Russell
- [Bioperl-l] Gene name to Accession id
gopu_36
- [Bioperl-l] genome position mapping of RefSeq IDs
Robert Citek
- [Bioperl-l] Google Summer of Code: application submitted, action needed
Hilmar Lapp
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Hilmar Lapp
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Hilmar Lapp
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Mark A. Jensen
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Hilmar Lapp
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Chris Fields
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Hilmar Lapp
- [Bioperl-l] Google Summer of Code: Call for Bio* Volunteers
Hilmar Lapp
- [Bioperl-l] Help in Programming a substitution routine
manni122
- [Bioperl-l] Help in Programming a substitution routine
Torsten Seemann
- [Bioperl-l] How to access an array of codons
manni122
- [Bioperl-l] How to access an array of codons
Dave Messina
- [Bioperl-l] How to access an array of codons
Bruno Vecchi
- [Bioperl-l] How to access an array of codons
manni122
- [Bioperl-l] How to access an array of codons
Chris Fields
- [Bioperl-l] How to access an array of codons
Kevin Brown
- [Bioperl-l] How to access an array of codons
Smithies, Russell
- [Bioperl-l] How to access an array of codons
manni122
- [Bioperl-l] How to run this "bp_search2gff.pl"
ajay
- [Bioperl-l] How to run this "bp_search2gff.pl"
Dan Bolser
- [Bioperl-l] Implementing Logistic Regression for data anaylsis
Abhishek Pratap
- [Bioperl-l] Indexing HMMER reports
Toni Hermoso Pulido
- [Bioperl-l] Indexing HMMER reports
Jason Stajich
- [Bioperl-l] Indexing HMMER reports
Chris Fields
- [Bioperl-l] Indexing HMMER reports
Mauricio Herrera Cuadra
- [Bioperl-l] Indexing HMMER reports
Toni Hermoso Pulido
- [Bioperl-l] Indexing HMMER reports
Brian Osborne
- [Bioperl-l] Indexing HMMER reports
Chris Fields
- [Bioperl-l] Invitation/Proposal
Juan Jovel
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
albezg
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Mark A. Jensen
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Mark A. Jensen
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Chris Fields
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Mark A. Jensen
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Chris Fields
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Mark A. Jensen
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Jay Hannah
- [Bioperl-l] issues with Bio::SimpleAlign add_seq function
Mark A. Jensen
- [Bioperl-l] minor bug in Bio::FeatureIO::gff
Smithies, Russell
- [Bioperl-l] minor bug in Bio::FeatureIO::gff
Chris Fields
- [Bioperl-l] OBF application for Summer of Code has been rejected
Hilmar Lapp
- [Bioperl-l] OBF application for Summer of Code has been rejected
Mark A. Jensen
- [Bioperl-l] Offering to help
Bruno Vecchi
- [Bioperl-l] Offering to help
Heikki Lehvaslaiho
- [Bioperl-l] Offering to help
Chris Fields
- [Bioperl-l] Offering to help
Bryan Bishop
- [Bioperl-l] Offering to help
Caroline
- [Bioperl-l] Offering to help
Chris Fields
- [Bioperl-l] Offering to help
Bryan Bishop
- [Bioperl-l] Offering to help
Chris Fields
- [Bioperl-l] Offering to help
Bryan Bishop
- [Bioperl-l] Offering to help
Bruno Vecchi
- [Bioperl-l] Offering to help
Chris Fields
- [Bioperl-l] Offering to help
Chris Fields
- [Bioperl-l] Offering to help
Adam Witney
- [Bioperl-l] Offering to help
Bryan Bishop
- [Bioperl-l] Offering to help
Kevin Clancy
- [Bioperl-l] Offering to help
Chris Mungall
- [Bioperl-l] Opportunity: bioinformatics programmer/analyst at Stowers Institute for Medical Research
Cook, Malcolm
- [Bioperl-l] Organism Classification
shalabh sharma
- [Bioperl-l] Organism Classification
michael watson (IAH-C)
- [Bioperl-l] Parsing Blast Report
shalabh sharma
- [Bioperl-l] Parsing Blast Report
Mark A. Jensen
- [Bioperl-l] Parsing Blast Report
Scott Markel
- [Bioperl-l] Parsing Blast Report
shalabh sharma
- [Bioperl-l] Perl developer vacancy at WTSI
James Gilbert
- [Bioperl-l] Primer3 help
Paolo Pavan
- [Bioperl-l] Primer3 help
Chris Fields
- [Bioperl-l] Primer3 Redux
Chris Fields
- [Bioperl-l] problem about format convertion
苏斐
- [Bioperl-l] problem about format convertion
Dave Messina
- [Bioperl-l] problem about format convertion
Dave Messina
- [Bioperl-l] problem about format convertion
Dave Messina
- [Bioperl-l] problem about format convertion
Chris Fields
- [Bioperl-l] problem of bioperl on mac
MADSGENE
- [Bioperl-l] problem of bioperl on mac
Kevin Brown
- [Bioperl-l] problem of bioperl on mac
Koen van der Drift
- [Bioperl-l] problem to fit genomic coordinates
Laurent MANCHON
- [Bioperl-l] problem to fit genomic coordinates
Kevin Brown
- [Bioperl-l] problem to fit genomic coordinates
Kevin Brown
- [Bioperl-l] problem to fit genomic coordinates
Laurent Manchon
- [Bioperl-l] problem to fit genomic coordinates
Chris Fields
- [Bioperl-l] problem to fit genomic coordinates
Laurent MANCHON
- [Bioperl-l] problem to fit genomic coordinates
Chris Fields
- [Bioperl-l] problem to fit genomic coordinates
Laurent MANCHON
- [Bioperl-l] problem to fit genomic coordinates
Chris Fields
- [Bioperl-l] problem to fit genomic coordinates
Felipe Figueiredo
- [Bioperl-l] problem to fit genomic coordinates
Chris Fields
- [Bioperl-l] problem to fit genomic coordinates
Scott Cain
- [Bioperl-l] problem to fit genomic coordinates
Laurent MANCHON
- [Bioperl-l] problem to fit genomic coordinates
Sean Davis
- [Bioperl-l] problem to fit genomic coordinates
Chris Fields
- [Bioperl-l] problem to fit genomic coordinates
Mark A. Jensen
- [Bioperl-l] problem to fit genomic coordinates
Smithies, Russell
- [Bioperl-l] problem with bioperl-ext-1.4
nary raveloson
- [Bioperl-l] problem with bioperl-ext-1.4
Kevin Brown
- [Bioperl-l] problem with bioperl-ext-1.4
Lori G. Wilson
- [Bioperl-l] problem with bioperl-ext-1.4
Chris Fields
- [Bioperl-l] Problems after changing display_id of a sequence in SimpleAlign
albezg
- [Bioperl-l] Problems after changing display_id of a sequence in SimpleAlign
Jason Stajich
- [Bioperl-l] Problems with a while loop, please help
manni122
- [Bioperl-l] Problems with a while loop, please help
Mark A. Jensen
- [Bioperl-l] Problems with a while loop, please help
Dave Messina
- [Bioperl-l] Problems with a while loop, please help
Lincoln Stein
- [Bioperl-l] Proposal for documentation generation
Pjotr Prins
- [Bioperl-l] Query about Bioperl and Mysql
Sanjay Harke
- [Bioperl-l] Question about parsing a gb file
Paolo Pavan
- [Bioperl-l] Question about parsing a gb file
Torsten Seemann
- [Bioperl-l] Question about parsing a gb file
Mark A. Jensen
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Dan Bolser
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Dan Bolser
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Dave Messina
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Chris Fields
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Dan Bolser
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Dan Bolser
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Phillip San Miguel
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Phillip San Miguel
- [Bioperl-l] Question about the definition of 'gaps' in blast -m8 output...
Phillip San Miguel
- [Bioperl-l] Re mote Blast and Report
gopu_36
- [Bioperl-l] Re mote Blast and Report
Ocar Campos
- [Bioperl-l] reading and writing tree
Peter Menzel
- [Bioperl-l] reading and writing tree
Mark A. Jensen
- [Bioperl-l] reading and writing tree
Mark A. Jensen
- [Bioperl-l] reading gff3?
Smithies, Russell
- [Bioperl-l] reading gff3?
Kevin Brown
- [Bioperl-l] reading gff3?
Scott Cain
- [Bioperl-l] reading gff3?
Smithies, Russell
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Smithies, Russell
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Bernd Web
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Chris Fields
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Chris Fields
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Smithies, Russell
- [Bioperl-l] reformating dna sequence containing ambiguity symbols
Smithies, Russell
- [Bioperl-l] Regarding Bioperl help for windows server 2003
Sanjay Harke
- [Bioperl-l] Regarding Bioperl help for windows server 2003
Alden Huang
- [Bioperl-l] Regarding Bioperl help for windows server 2003
Spiros Denaxas
- [Bioperl-l] Regarding help for Bioperl on window server 2003
Jason Stajich
- [Bioperl-l] Regarding help for Bioperl with Local MYsql database
Sanjay Harke
- [Bioperl-l] Regarding help for Bioperl with Local MYsql database
Hilmar Lapp
- [Bioperl-l] Regarding help for Bioperl with Local MYsql database
Juan Jovel
- [Bioperl-l] Reminder: Student application deadline for Summer of Code 2009
Hilmar Lapp
- [Bioperl-l] Remote Blast and Report
Smithies, Russell
- [Bioperl-l] Remote Blast and Report
Ocar Campos
- [Bioperl-l] Remote Blast and Report
Jason Stajich
- [Bioperl-l] Remote Blast and Report
Ocar Campos
- [Bioperl-l] Remote Blast and Report
Ocar Campos
- [Bioperl-l] Remote Blast and Report
Ocar Campos
- [Bioperl-l] RemoteBlast filter option
Xiang, Philip
- [Bioperl-l] RemoteBlast filter option
Smithies, Russell
- [Bioperl-l] Resources for Perl newbies
Mark A. Jensen
- [Bioperl-l] Resources for Perl newbies
Jay Hannah
- [Bioperl-l] Resources for Perl newbies
Chris Fields
- [Bioperl-l] Resources for Perl newbies
Mark A. Jensen
- [Bioperl-l] Rosetta Academic Training Webinar
Nir London
- [Bioperl-l] sanjay Harke sent you a Friend Request on Yaari
sanjay Harke
- [Bioperl-l] sanjay Harke sent you a Friend Request on Yaari
sanjay Harke
- [Bioperl-l] sanjay Harke sent you a Friend Request on Yaari
sanjay Harke
- [Bioperl-l] sanjay Harke sent you a Friend Request on Yaari
Hilmar Lapp
- [Bioperl-l] sanjay Harke sent you a Friend Request on Yaari
Abhishek Pratap
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] script to calculate percentage identity for BLAT psl
Jason Stajich
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] script to calculate percentage identity for BLAT psl
Jason Stajich
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] script to calculate percentage identity for BLAT psl
gopu_36
- [Bioperl-l] Shweta Kagliwal sent you a Friend Request on Yaari
Shweta Kagliwal
- [Bioperl-l] Sliding window alignment How?
kenzy ken
- [Bioperl-l] Summer of Code 2009
Hilmar Lapp
- [Bioperl-l] Summer of Code project idea: build-out ofPopGen::Simulation::Coalescent
Mark A. Jensen
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Mark A. Jensen
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Jason Stajich
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Mark A. Jensen
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Chris Fields
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Mark A. Jensen
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Jason Stajich
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Mark A. Jensen
- [Bioperl-l] Summer of Code project idea: build-out of PopGen::Simulation::Coalescent
Jonathan Leto
- [Bioperl-l] taxonomy ID
shalabh sharma
- [Bioperl-l] taxonomy ID
Smithies, Russell
- [Bioperl-l] thanks wiki-slayers
Mark A. Jensen
- [Bioperl-l] thanks wiki-slayers
Chris Fields
- [Bioperl-l] thanks wiki-slayers
Jason Stajich
- [Bioperl-l] walk through array of two sequences splitted into codons
manni122
Last message date:
Tue Mar 31 22:59:45 UTC 2009
Archived on: Mon Jun 16 02:50:11 UTC 2014
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