[Bioperl-l] problem to fit genomic coordinates

[Laurent MANCHON]

okay, you are right,
but i think in my opinion that my question is a good question about 
parsing enormous
range of intervals.
The problem is not perl, bioperl, or other language, it's just an 
algorithmic question.
I'm not a professionnal in Bioperl and i don't know what is possible to 
do with all the Bioperl modules.
So if you think it's possible to resolve my question with Bioperl maybe 
you are right, but in my position i stay in the same point.
If you want i send you the two files needed in my question. And if you 
are agree try to use Bioperl to resolve it. Maybe it's not possible because
files are big, i don't know.



Chris Fields a écrit :
> (edited for those with sensitive eyes)
>
> Laurent,
>
> Please keep all responses, no matter how puerile, on the mail list ;>
>
> We're trying to point out the blatantly obvious: this isn't the place 
> for your question.  Sorry if that irritates you.  And, to reiterate, 
> don't be surprised if you get some nasty responses.
>
> chris
>
> (hoping this isn't one of the GSoC students, as he's introducing 
> Laurent to his spam filter)
>
> On Mar 26, 2009, at 10:04 AM, Laurent MANCHON wrote:
>
>> p*** off
>>
>> Chris Fields a écrit :
>>>
>>> On Mar 26, 2009, at 8:36 AM, Laurent MANCHON wrote:
>>>
>>>> Chris Fields a écrit :
>>>>>
>>>>> On Mar 26, 2009, at 3:31 AM, Laurent MANCHON wrote:
>>>>>
>>>>>> yes but this is a school problem that my teacher ask us to 
>>>>>> resolve without using Bioperl modules !
>>>>>
>>>>> I didn't bother reading beyond that sentence.  Not to state the 
>>>>> absolute obvious here, but:
>>>>>
>>>>> 1) you are posting to the bioperl list for a non-bioperl-related 
>>>>> question, and
>>>> genomic coordinates are not questions about biology ?
>>>> i'm speaking about GENOME, and not GEOGRAPHY
>>>
>>> And this is a mail list for BioPerl (the toolkit), not perl and 
>>> biology.  We will sometimes answer questions along these lines if 
>>> they are relevant, but apparently our answers (all notably 
>>> BioPerl-related, mind you) were tossed to the side and you asked for 
>>> more.
>>>
>>> I suppose you at least showed some honesty and revealed exactly why 
>>> you needed this answered, but again, don't be surprised if you get a 
>>> nasty response and no answers.  You won't get any from me.
>>>
>>>>> 2) you are committing one of the biggest no-no's for a list, 
>>>>> asking us to help you with your homework.
>>>> in bioperl you have BIO, okay but too you have PERL !
>>>
>>> Interesting how you skirted that last question.  We won't do your 
>>> homework for you.  Sorry.
>>>
>>> chris
>>>
>>>
>>
>>
>
>