[Bioperl-l] Indexing HMMER reports
Toni Hermoso Pulido
toniher at softcatala.cat
Tue Mar 10 00:58:26 UTC 2009
Hello,
I'm trying to index HMMER reports using:
http://www.bioperl.org/wiki/Module:Bio::Index::Hmmer
However, I have not found enough information in the module code examples
for being able to index and get info from those reports.
I would like to get HSP alignments associated to hit accession codes
from reports distributed in several files.
Does anyone have experience on this?
After dumping variables, I think I'm just indexing report files, but not
its contents.
Best regards,
--
Toni Hermoso Pulido
http://www.cau.cat
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