September 2009 Archives by thread

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Starting: Tue Sep 1 01:22:14 EDT 2009
Ending: Wed Sep 30 19:14:15 EDT 2009
Messages: 155

• [Biopython] Phylogenetic trees with biopython?   Italo Maia
• [Biopython] Phylogenetic trees with biopython?   Matthew Strand
• [Biopython] Phylogenetic trees with biopython?   Matthew Strand
• [Biopython] Phylogenetic trees with biopython?   David Winter
  • [Biopython] Phylogenetic trees with biopython?   Peter
    • [Biopython] Phylogenetic trees with biopython?   David Winter
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Paulo Nuin
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Paulo Nuin
      • [Biopython] Phylogenetic trees with biopython?   David Winter
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Peter
      • [Biopython] Phylogenetic trees with biopython?   Italo Maia
      • [Biopython] Phylogenetic trees with biopython?   Peter
      • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   natassa
      • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
• [Biopython] IDLE problem   Peter
• [Biopython] IDLE problem   Peter
  • [Biopython] IDLE problem   David Winter
• [Biopython] Removing deprecated module Bio.EUtils   Peter
  • [Biopython] Removing deprecated module Bio.EUtils   Peter
• [Biopython] Removing deprecated BLAST HTML parser   Peter
  • [Biopython] Removing deprecated BLAST HTML parser   Peter
• [Biopython] How to plot PHYLIP phylogenetic tree?!   Italo Maia
  • [Biopython] How to plot PHYLIP phylogenetic tree?!   Peter
    • [Biopython] How to plot PHYLIP phylogenetic tree?!   Italo Maia
      • [Biopython] How to plot PHYLIP phylogenetic tree?!   Italo Maia
      • [Biopython] How to plot PHYLIP phylogenetic tree?!   Peter
      • [Biopython] How to plot PHYLIP phylogenetic tree?!   Italo Maia
• [Biopython] Question about efetch output format   jorma kala
  • [Biopython] Question about efetch output format   Peter
    • [Biopython] Question about efetch output format   bar tomas
• [Biopython] Residue Depth module.   Bhima Auro van der Molen
• [Biopython] Fred Hutchinson Cancer Research Center - Systems Analyst/Programmer III/IV (AD-22564)   Duran, Alysha M
• [Biopython] DSSP and secondary structure   xyz
  • [Biopython] DSSP and secondary structure   km
  • [Biopython] DSSP and secondary structure   Peter
• [Biopython] IPI fetching   Yvan Strahm
  • [Biopython] IPI fetching   Peter
    • [Biopython] IPI fetching   Yvan Strahm
      • [Biopython] IPI fetching   Peter
• [Biopython] Problem with pdb-file parsing   Christian Schäfer
  • [Biopython] Problem with pdb-file parsing   Peter
• [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
  • [Biopython] Biopython and Snow Leopard   Peter
    • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Paulo Nuin
      • [Biopython] Biopython and Snow Leopard   Peter
      • [Biopython] Biopython and Snow Leopard   Paulo Nuin
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Kelly F Oakeson
      • [Biopython] Biopython and Snow Leopard   Leighton Pritchard
      • [Biopython] Biopython and Snow Leopard   Peter
  • [Biopython] Biopython and Snow Leopard   Leighton Pritchard
• [Biopython] Biopython and Snow Leopard   Leighton Pritchard
• [Biopython] Deprecating Bio.EZRetrieve, NetCatch, FilteredReader and SGMLHandle   Peter
• [Biopython] Creating GenBank files   Peter Saffrey
  • [Biopython] Creating GenBank files   Peter
    • [Biopython] Creating GenBank files   Peter
    • [Biopython] Creating GenBank files   Peter Saffrey
      • [Biopython] Creating GenBank files   Peter
      • [Biopython] Creating GenBank files   Peter
• [Biopython] Write chains...   Yasser Almeida Hernandez
  • [Biopython] Write chains...   Peter
• [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Michael S. Koeris
  • [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Peter
    • [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Michael S. Koeris
      • [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Peter
• [Biopython] MetaGene and GreenGene   Kyle Ellrott
• [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Peter
  • [Biopython] Formatting of the xml return from Entrez DB Gene is not parsed correctly   Michael S. Koeris
• [Biopython] Need help in making a back table for the CodonTable object   Alexander Castro
  • [Biopython] Need help in making a back table for the CodonTable object   Peter
    • [Biopython] Need help in making a back table for the CodonTable object   Andrew Dalke
    • [Biopython] Need help in making a back table for the CodonTable object   Alexander Castro
      • [Biopython] Need help in making a back table for the CodonTable object   Peter
• [Biopython] Announcing Plone4bio 1.0   Ivan Rossi
• [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
  • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   natassa
    • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
      • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
      • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
• [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
  • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Chris Fields
    • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Chris Fields
      • [Biopython] SeqIO for fasta conversion of Illumina files with > 60 bp   Peter
• [Biopython] [Velvet-users] Shuffler for wrapped fastas   Peter
• [Biopython] Permissions for Bio, BioSQL, Martel   Finsen Chiu
  • [Biopython] Permissions for Bio, BioSQL, Martel   Peter
    • [Biopython] Permissions for Bio, BioSQL, Martel   Finsen Chiu
      • [Biopython] Permissions for Bio, BioSQL, Martel   Peter
      • [Biopython] Permissions for Bio, BioSQL, Martel   Finsen Chiu
• [Biopython] ETE: a python Environment for Tree Exploration   Jaime Huerta Cepas
• [Biopython] Searching for and downloading sequences using the history   Carlos Javier Borroto
  • [Biopython] Searching for and downloading sequences using the history   Carlos Javier Borroto
    • [Biopython] Searching for and downloading sequences using the history   Carlos Javier Borroto
    • [Biopython] Searching for and downloading sequences using the history   Peter
  • [Biopython] Searching for and downloading sequences using the history   Martin MOKREJŠ
• [Biopython] ETE: a python Environment for Tree Exploration   Frederico Arnoldi
• [Biopython] Searching for and downloading sequences using the history   Peter
• [Biopython] Shuffler for wrapped fastas   Peter
  • [Biopython] Shuffler for wrapped fastas   Tanya Golubchik
• [Biopython] Protein side-chain angles from a PDB file   Rodrigo faccioli
  • [Biopython] Protein side-chain angles from a PDB file   Peter Cock
    • [Biopython] Protein side-chain angles from a PDB file   Steve Darnell
      • [Biopython] Protein side-chain angles from a PDB file   Rodrigo faccioli
      • [Biopython] Protein side-chain angles from a PDB file   Steve Darnell
      • [Biopython] Protein side-chain angles from a PDB file   Rodrigo faccioli
• [Biopython] Biopython 1.52 released   Peter Cock
• [Biopython] MOODS: fast search for position weight matrix matches in DNA sequences.   Peter
  • [Biopython] MOODS: fast search for position weight matrix matches in DNA sequences.   Bartek Wilczynski
    • [Biopython] MOODS: fast search for position weight matrix matches in DNA sequences.   Peter
      • [Biopython] MOODS: fast search for position weight matrix matches in DNA sequences.   Brad Chapman
      • [Biopython] MOODS: fast search for position weight matrix matches in DNA sequences.   Bartek Wilczynski
• [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Michael S. Koeris
  • [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Peter
    • [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Michael S. Koeris
      • [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Peter
      • [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Carlos Javier Borroto
      • [Biopython] Blast.NCBIWWW qblast taxonID search space limitation   Peter
• [Biopython] get back raw records with SeqIO?   Cedar McKay
  • [Biopython] get back raw records with SeqIO?   Peter
    • [Biopython] get back raw records with SeqIO?   Peter
    • [Biopython] get back raw records with SeqIO?   Cedar McKay
• [Biopython] Trimming FASTQ reads, was: [Velvet-users] Read length as a parameter?   Peter
• [Biopython] Correcting short read errors based on k-mer coverage   Peter
  • [Biopython] Correcting short read errors based on k-mer coverage   Peter
• [Biopython] SeqIO parser error   Michael S. Koeris
  • [Biopython] SeqIO parser error   Peter
    • [Biopython] SeqIO parser error   Peter
• [Biopython] Correcting short read errors based on k-mer coverage   Peter
  • [Biopython] Correcting short read errors based on k-mer coverage   Peter
• [Biopython] Nexus.Tree fails to import nexus tree file   Thomas Keller
  • [Biopython] Nexus.Tree fails to import nexus tree file   Peter
    • [Biopython] Nexus.Tree fails to import nexus tree file   Peter
• [Biopython] Bit encoded sequences, was: Correcting short read errors based on k-mer coverage   Peter
• [Biopython] Deprecating Bio.Prosite and Bio.Enzyme   Peter
• [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Stefanie Lück
  • [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Brad Chapman
    • [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Peter
  • [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Steve Lianoglou
  • [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Peter
    • [Biopython] alignment/matching algorithm whichs allows missmatches at certain positions   Stefanie Lück

Last message date: Wed Sep 30 19:14:15 EDT 2009
Archived on: Wed Sep 30 20:40:11 EDT 2009

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