[Biopython] Phylogenetic trees with biopython?

Peter biopython at maubp.freeserve.co.uk
Thu Sep 3 12:38:47 UTC 2009


On Thu, Sep 3, 2009 at 1:22 PM, Italo Maia<italo.maia at gmail.com> wrote:
> Not working
> /usr/bin/clustalw -infile=/home/myuser/Temp/coi.dnd -tree -outputtree=PHYLIP
> -tossgaps -clustering NJ
>
> Working
> /usr/bin/clustalw -infile=/home/myuser/Temp/coi.dnd -tree -outputtree=PHYLIP
> -tossgaps -clustering=NJ

OK, yes. Fixed in CVS. I also made the boot labels argument use an equals
(by eye all the rest looked fine). Could you confirm that works?

Thanks

Peter



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