September 2009 Archives by thread

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Starting: Tue Sep 1 09:06:39 EDT 2009
Ending: Wed Sep 30 11:27:03 EDT 2009
Messages: 138

• [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Brad Chapman
  • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
    • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Brad Chapman
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Michiel de Hoon
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
      • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
  • [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO   Peter
• [Biopython-dev] sff reader   Peter
• [Biopython-dev] OBO2OWL parser / converter   Ed Cannon
• [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Biopython] Phylogenetic trees with biopython?   Peter
  • [Biopython-dev] [Biopython] Phylogenetic trees with biopython?   Peter
    • [Biopython-dev] [Biopython] Phylogenetic trees with biopython?   David Winter
      • [Biopython-dev] [Biopython] Phylogenetic trees with biopython?   Peter
      • [Biopython-dev] Tests for Emboss Phylip wrappers   David Winter
      • [Biopython-dev] Tests for Emboss Phylip wrappers   Peter
      • [Biopython-dev] Tests for Emboss Phylip wrappers   Eric Talevich
      • [Biopython-dev] Tests for Emboss Phylip wrappers   Peter
      • [Biopython-dev] Tests for Emboss Phylip wrappers   David Winter
      • [Biopython-dev] Tests for Emboss Phylip wrappers   Peter
• [Biopython-dev] Bio.Entrez.parse   Michiel de Hoon
  • [Biopython-dev] Bio.Entrez.parse   Peter Cock
• [Biopython-dev] Anonymous CVS working again :)   Peter
• [Biopython-dev] [Root-l] Anonymous CVS working again :)   Peter
• [Biopython-dev] [Root-l] Anonymous CVS working again :)   Peter
• [Biopython-dev] [Bug 2781] Bio.PDB Structure instances cannot be deepcopied   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2910] New: Parsing some pdb files results in shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Parsing some pdb files results in shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Bio.PDB build_peptides sometimes gives shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Bio.PDB build_peptides sometimes gives shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Bio.PDB build_peptides sometimes gives shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Bio.PDB build_peptides sometimes gives shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2910] Bio.PDB build_peptides sometimes gives shorter peptide sequences than expected   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2894] Jython List difference causes failed assertion in CondonTable Fix+Patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2887] set iteration order dependency in Bio.Data.CodonTable   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2895] Bio.Restriction.Restriction_Dictionary Jython Error Fix+Patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Another Biopython release?   Peter
  • [Biopython-dev] Another Biopython release?   Bartek Wilczynski
    • [Biopython-dev] Another Biopython release?   Eric Talevich
      • [Biopython-dev] Another Biopython release?   Bartek Wilczynski
      • [Biopython-dev] Another Biopython release?   Peter
      • [Biopython-dev] Another Biopython release?   Tiago Antão
    • [Biopython-dev] Another Biopython release?   Brad Chapman
      • [Biopython-dev] Another Biopython release?   Peter
  • [Biopython-dev] Another Biopython release?   Tiago Antão
    • [Biopython-dev] Another Biopython release?   Peter
      • [Biopython-dev] Another Biopython release?   Tiago Antão
      • [Biopython-dev] Another Biopython release?   Peter
      • [Biopython-dev] Another Biopython release?   Tiago Antão
      • [Biopython-dev] Another Biopython release?   Peter
• [Biopython-dev] [Bug 2904] Interface for Novoalign   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Another Biopython release?   Kristian Rother
  • [Biopython-dev] Another Biopython release?   Peter
• [Biopython-dev] Using PendingDeprecation for obsolete modules   Peter
• [Biopython-dev] Entrez ELink history - XML/DTD or Biopython bug?   Peter
  • [Biopython-dev] Entrez ELink history - XML/DTD or Biopython bug?   Peter
• [Biopython-dev] draft release announcement   David Winter
  • [Biopython-dev] draft release announcement   Tiago Antão
    • [Biopython-dev] draft release announcement   David Winter
      • [Biopython-dev] draft release announcement   Tiago Antão
  • [Biopython-dev] draft release announcement   Peter
  • [Biopython-dev] draft release announcement   David Winter
• [Biopython-dev] draft blog post for 1.52 stuff   David Winter
  • [Biopython-dev] draft blog post for 1.52 stuff   Peter
    • [Biopython-dev] draft blog post for 1.52 stuff   Peter
• [Biopython-dev] Blast records   Michiel de Hoon
  • [Biopython-dev] Blast records   Peter
    • [Biopython-dev] Blast records   Michiel de Hoon
• [Biopython-dev] CVS freeze for Biopython 1.52   Peter
  • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
    • [Biopython-dev] CVS freeze for Biopython 1.52   Bartek Wilczynski
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Bartek Wilczynski
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Bartek Wilczynski
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
      • [Biopython-dev] CVS freeze for Biopython 1.52   Peter
• [Biopython-dev] Biopython 1.52 released   Peter Cock
  • [Biopython-dev] Biopython 1.52 released   Peter Cock
    • [Biopython-dev] Biopython 1.52 released   Brad Chapman
      • [Biopython-dev] Biopython 1.52 released   Peter Cock
• [Biopython-dev] Blast records   Peter
  • [Biopython-dev] Blast records   Michiel de Hoon
• [Biopython-dev] Code review request for phyloxml branch   Eric Talevich
  • [Biopython-dev] Code review request for phyloxml branch   Peter
    • [Biopython-dev] Code review request for phyloxml branch   Jaime Huerta Cepas
      • [Biopython-dev] Code review request for phyloxml branch   Eric Talevich
      • [Biopython-dev] Code review request for phyloxml branch   Jaime Huerta Cepas
      • [Biopython-dev] Code review request for phyloxml branch   Eric Talevich
      • [Biopython-dev] Code review request for phyloxml branch   Jaime Huerta Cepas
      • [Biopython-dev] Code review request for phyloxml branch   Peter
      • [Biopython-dev] Code review request for phyloxml branch   Hilmar Lapp
      • [Biopython-dev] Code review request for phyloxml branch   Brad Chapman
      • [Biopython-dev] Code review request for phyloxml branch   Hilmar Lapp
      • [Biopython-dev] Code review request for phyloxml branch   Jaime Huerta Cepas
      • [Biopython-dev] Code review request for phyloxml branch   Jaime Huerta Cepas
    • [Biopython-dev] Code review request for phyloxml branch   Brad Chapman
      • [Biopython-dev] Code review request for phyloxml branch   Peter
    • [Biopython-dev] Code review request for phyloxml branch   Eric Talevich
      • [Biopython-dev] Code review request for phyloxml branch   Peter
      • [Biopython-dev] Code review request for phyloxml branch   Hilmar Lapp
      • [Biopython-dev] Code review request for phyloxml branch   Peter
• [Biopython-dev] Committing to github...   Peter
  • [Biopython-dev] Committing to github...   Peter
    • [Biopython-dev] Committing to github...   Eric Talevich
• [Biopython-dev] Git documentation on wiki   Peter
• [Biopython-dev] [Bug 2894] Jython List difference causes failed assertion in CondonTable Fix+Patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2891] Jython test_NCBITextParser fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2895] Bio.Restriction.Restriction_Dictionary Jython Error Fix+Patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2893] Jython test_prosite fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2892] Jython MatrixInfo.py fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2891] Jython test_NCBITextParser fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2890] Getting setup.py to work in Jython   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2895] Bio.Restriction.Restriction_Dictionary Jython Error Fix+Patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2893] Jython test_prosite fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2892] Jython MatrixInfo.py fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2918] New: Entrez parser fails on Jython - XMLParser lacks SetParamEntityParsing   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] fpc and gff   Jose Blanca
• [Biopython-dev] fpc and gff   Jose Blanca
  • [Biopython-dev] fpc and gff   Peter
    • [Biopython-dev] fpc and gff   Brad Chapman
      • [Biopython-dev] fpc and gff   Peter
• [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2919] New: Writing SeqFeature qualifiers   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2919] Writing SeqFeature qualifiers   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2891] Jython test_NCBITextParser fix+patch   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Biopython] SeqRecord reverse complement method?   Peter

Last message date: Wed Sep 30 11:27:03 EDT 2009
Archived on: Wed Sep 30 11:27:10 EDT 2009

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