November 2007 Archives by subject

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Starting: Thu Nov 1 00:35:13 EDT 2007
Ending: Fri Nov 30 10:19:46 EST 2007
Messages: 126

• [Biopython-dev] [Bug 1921] BioSeqDatabase.load() method fails   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 1921] BioSeqDatabase.load() method fails   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 1982] Patch to BioSQL/Loader.py   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 1987] Alphabet.Gapped does not retain gap character   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 19] implement dbsearch Registry   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 19] implement dbsearch Registry   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 19] implement dbsearch Registry   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2363] Some python files not stored as plain text in CVS?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2380] Bio.Nexus is adding "?" and "-" to Bio.Data.IUPACData.ambiguous_dna_values   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2380] Bio.Nexus is adding "?" and "-" to Bio.Data.IUPACData.ambiguous_dna_values   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2380] Bio.Nexus is adding "?" and "-" to Bio.Data.IUPACData.ambiguous_dna_values   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2381] translate and transcibe methods for the Seq object (in Bio.Seq)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2386] Bio.Seq.Seq and MutableSeq count() method only works for single residues   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2393] New: Bio.GenBank.NCBIDictionary fails with release 1.44   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2394] INSERT INTO seqfeature_qualifier_value ...   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2394] INSERT INTO seqfeature_qualifier_value ...   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2394] INSERT INTO seqfeature_qualifier_value ...   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2394] New: INSERT INTO seqfeature_qualifier_value ...   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] Need a commit in BioSQL with MySQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] Need a commit in BioSQL with MySQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] Need a commit in BioSQL with MySQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] Need a commit in BioSQL with MySQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] Need a commit in BioSQL with MySQL   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2395] New: Need a commit in db.load (BioSQL with MySQL)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2396] BioSQL loader does not store sequence level annotations dict   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2396] BioSQL loader does not store sequence level annotations dict   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2396] New: BioSQL loader does not store sequence level annotations dict   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2397] New: test_PopGen_FDist does not fail gracefully on Windows   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2397] test_PopGen_FDist does not fail gracefully on Windows   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] New: prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2403] prosite parser can't handle new PROSITE/PRORULE format   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2405] BioSQL gives UserWarning: ... not recognised as database type: temporarily accepting key   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2405] BioSQL gives UserWarning: ... not recognised as database type: temporarily accepting key   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2405] db_xref and UserWarning: XXX not recognised as database type: temporarily accepting key   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2405] New: BioSQL gives UserWarning: ... not recognised as database type: temporarily accepting key   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2408] GenBank records do not contain U's   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2408] GenBank records do not contain U's   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2408] New: GenBank records do not contain U's   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2410] DBSeq & DBSeqRecord should subclass Seq & SeqRecord   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2410] New: DBSeq & DBSeqRecord should subclass Seq & SeqRecord   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2411] Element access and slicing of DBSeq object (BioSQL's Seq object)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2411] Element access and slicing of DBSeq object (BioSQL's Seq object)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2411] Element access and slicing of DBSeq object (BioSQL's Seq object)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2411] Element access and slicing of DBSeq object (BioSQL's Seq object)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2411] New: Slicing the DBSeq object (BioSQL's Seq object)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2412] NCBIXML. fails parsing with blast 2.2.15 in special cases (Karlin-Altschul)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2412] NCBIXML. fails parsing with blast 2.2.15 in special cases (Karlin-Altschul)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2412] NCBIXML. fails parsing with blast 2.2.15 in special cases (Karlin-Altschul)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2412] New: NCBIXML. fails parsing with blast 2.2.15 in special cases (Karlin-Altschul)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Accessing built-in data files   Tiago Antão
• [Biopython-dev] Accessing built-in data files   Peter
• [Biopython-dev] Accessing built-in data files   Tiago Antão
• [Biopython-dev] Accessing built-in data files   Peter
• [Biopython-dev] Accessing built-in data files   Tiago Antão
• [Biopython-dev] Accessing built-in data files   Peter
• [Biopython-dev] Accessing built-in data files   Tiago Antão
• [Biopython-dev] Accessing built-in data files   Sebastian Bassi
• [Biopython-dev] Bio.WWW.ExPASy   Michiel De Hoon
• [Biopython-dev] Bio.WWW.ExPASy   Peter Cock
• [Biopython-dev] Bio.WWW.ExPASy   Michiel De Hoon
• [Biopython-dev] Bio.WWW; database access   Michiel De Hoon
• [Biopython-dev] Bio.WWW; database access   Peter
• [Biopython-dev] Bio.WWW; database access   Michiel De Hoon
• [Biopython-dev] Bio.WWW; database access   Peter
• [Biopython-dev] Bio.WWW; database access   Michiel De Hoon
• [Biopython-dev] Bio.WWW; database access   Michiel De Hoon
• [Biopython-dev] Bio.WWW; database access   Michiel De Hoon
• [Biopython-dev] Biopython SVN Transition   Peter
• [Biopython-dev] Biopython SVN Transition   Chris Lasher
• [Biopython-dev] Biopython SVN Transition   Chris Lasher
• [Biopython-dev] BioSQL   Peter
• [Biopython-dev] BioSQL   Michiel De Hoon
• [Biopython-dev] BioSQL   Peter
• [Biopython-dev] BioSQL   Michiel De Hoon
• [Biopython-dev] BioSQL   Peter
• [Biopython-dev] coalescent tutorial text   Tiago Antao
• [Biopython-dev] Making mxTextTools an optional dependency insetup.py   Michiel De Hoon
• [Biopython-dev] Making mxTextTools an optional dependency in setup.py   Peter
• [Biopython-dev] Next release (was re: bug 2993)   Peter
• [Biopython-dev] Next release (was re: bug 2993)   Michiel De Hoon
• [Biopython-dev] Next release (was re: bug 2993)   Tiago Antão
• [Biopython-dev] Numeric dependencies, PDBParser.py   Jonathan Hilmer
• [Biopython-dev] Numeric dependencies, PDBParser.py   Peter
• [Biopython-dev] resuming CVS updates   Tiago Antao
• [Biopython-dev] resuming CVS updates   Michiel De Hoon
• [Biopython-dev] uploading coalescent code   Tiago Antao
• [Biopython-dev] uploading coalescent code   Michiel De Hoon
• [Biopython-dev] uploading coalescent code   Tiago Antão
• [Biopython-dev] uploading coalescent code   Michiel De Hoon

Last message date: Fri Nov 30 10:19:46 EST 2007
Archived on: Fri Nov 30 10:19:52 EST 2007

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