[Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Nov 12 10:26:33 UTC 2007


http://bugzilla.open-bio.org/show_bug.cgi?id=2390





------- Comment #14 from biopython-bugzilla at maubp.freeserve.co.uk  2007-11-12 05:26 EST -------
Issue Two
---------
The cursor problem.  As I said, I've checked in the suggested fix from my
comment 7, since Eric Gibert suggested the same thing on the mailing list.
More or less the same issue was reported as bug 1979 with a slightly
different solution: http://bugzilla.open-bio.org/show_bug.cgi?id=1979

Regarding the cursor problem, reading up on bug 1921, since perhaps MySQL 5,
Biopython has needed to manually do a commit.  I've filed bug 2395
http://bugzilla.open-bio.org/show_bug.cgi?id=1921
http://bugzilla.open-bio.org/show_bug.cgi?id=2395


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