August 2009 Archives by date
Starting: Sat Aug 1 20:46:38 UTC 2009
Ending: Mon Aug 31 17:44:44 UTC 2009
Messages: 171
- [Biopython-dev] [Bug 2894] New: Jython List difference causes failed assertion in CondonTable Fix+Patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2894] Jython List difference causes failed assertion in CondonTable Fix+Patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2895] New: Bio.Restriction.Restriction_Dictionary Jython Error Fix+Patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2891] Jython test_NCBITextParser fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2892] Jython MatrixInfo.py fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2893] Jython test_prosite fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2894] Jython List difference causes failed assertion in CondonTable Fix+Patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] GSoC Weekly Update 11: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] RFC: RNAStructure package for BioPython
Kristian Rother
- [Biopython-dev] [Bug 2896] New: BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Deprecating Bio.Fasta?
Peter
- [Biopython-dev] [Wg-phyloinformatics] GSoC Weekly Update 11: PhyloXML for Biopython
Brad Chapman
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] RFC: RNAStructure package for BioPython
Brad Chapman
- [Biopython-dev] 1.52
Tiago Antão
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] RFC: RNAStructure package for BioPython
Peter
- [Biopython-dev] ApplicationResult and generic_run obsolete?
Peter
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Brad Chapman
- [Biopython-dev] RFC: RNAStructure package for BioPython
Hilmar Lapp
- [Biopython-dev] RFC: RNAStructure package for BioPython
Kristian Rother
- [Biopython-dev] RFC: RNAStructure package for BioPython
Peter
- [Biopython-dev] Deprecating Bio.Fasta?
Peter
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Wg-phyloinformatics] GSoC Weekly Update 11: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Wg-phyloinformatics] GSoC Weekly Update 11: PhyloXML for Biopython
Peter
- [Biopython-dev] [Wg-phyloinformatics] GSoC Weekly Update 11: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] [Wg-phyloinformatics] GSoC Weekly Update 11: PhyloXML for Biopython
Brad Chapman
- [Biopython-dev] ApplicationResult and generic_run obsolete?
Peter
- [Biopython-dev] ApplicationResult and generic_run obsolete?
Peter
- [Biopython-dev] ApplicationResult and generic_run obsolete?
Peter
- [Biopython-dev] Bio.SeqIO.convert function?
Peter
- [Biopython-dev] Unit tests for deprecated modules?
Peter
- [Biopython-dev] Unit tests for deprecated modules?
Peter
- [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Bio.SeqIO.convert function?
Peter
- [Biopython-dev] GSoC Weekly Update 12: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Peter
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] Bio.SeqIO.convert function?
Peter
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Brad Chapman
- [Biopython-dev] GSoC Weekly Update 12: PhyloXML for Biopython
Brad Chapman
- [Biopython-dev] ApplicationResult and generic_run obsolete?
Peter
- [Biopython-dev] Drafting announcement for Biopython 1.51?
Peter
- [Biopython-dev] GSoC Weekly Update 12: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] Drafting announcement for Biopython 1.51?
David Winter
- [Biopython-dev] Drafting announcement for Biopython 1.51?
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] Draft announcement for Biopython 1.51
David Winter
- [Biopython-dev] Drafting announcement for Biopython 1.51?
David Winter
- [Biopython-dev] Drafting announcement for Biopython 1.51?
Peter
- [Biopython-dev] Draft announcement for Biopython 1.51
Peter
- [Biopython-dev] [Biopython] Trimming adaptors sequences
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] sff reader
Blanca Postigo Jose Miguel
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] sff reader
Peter
- [Biopython-dev] Bio.SeqIO.convert function?
Peter
- [Biopython-dev] [Bug 2837] Reading Roche 454 SFF sequence read files in Bio.SeqIO
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Biopython 1.51 code freeze
Brad Chapman
- [Biopython-dev] Biopython 1.51 code freeze
Peter
- [Biopython-dev] Biopython 1.51 code freeze
Tiago Antão
- [Biopython-dev] Biopython 1.51 status
Brad Chapman
- [Biopython-dev] Biopython 1.51 status
Peter
- [Biopython-dev] Biopython 1.51 status
Peter
- [Biopython-dev] Biopython 1.51 status
Brad Chapman
- [Biopython-dev] Biopython 1.51 status
Peter
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Biopython 1.51 status
Eric Talevich
- [Biopython-dev] Biopython 1.51 status
Brad Chapman
- [Biopython-dev] Biopython 1.51 status
Bartek Wilczynski
- [Biopython-dev] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Marshall Hampton
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Peter
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Peter
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Marshall Hampton
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Marshall Hampton
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Marshall Hampton
- [Biopython-dev] old Martel release
Andrew Dalke
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Peter
- [Biopython-dev] old Martel release
Andrew Dalke
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Peter
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Marshall Hampton
- [Biopython-dev] GSoC final update: PhyloXML for Biopython
Eric Talevich
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Peter
- [Biopython-dev] old Martel release
Peter
- [Biopython-dev] biopython-1.51 test log, sage inclusion
Peter
- [Biopython-dev] [Bug 2619] Bio.PDB.MMCIFParser component MMCIFlex commented out in setup.py
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Moving from CVS to git
Hilmar Lapp
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Moving from CVS to git
Frank Kauff
- [Biopython-dev] [Wg-phyloinformatics] BioGeography update/BioPython tree module discussion
Nick Matzke
- [Biopython-dev] [Bug 2619] Bio.PDB.MMCIFParser component MMCIFlex commented out in setup.py
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Moving from CVS to git
Hilmar Lapp
- [Biopython-dev] Deprecating Bio.AlignAce and Bio.MEME?
Peter
- [Biopython-dev] Deprecating Bio.AlignAce and Bio.MEME?
Bartek Wilczynski
- [Biopython-dev] Deprecating Bio.AlignAce and Bio.MEME?
Peter
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] Deprecating Bio.AlignAce and Bio.MEME?
Peter
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] [Root-l] Moving from CVS to git
Peter
- [Biopython-dev] [Root-l] Moving from CVS to git
Chris Dagdigian
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Michiel de Hoon
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] [Root-l] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] [Root-l] Moving from CVS to git
Peter
- [Biopython-dev] [Root-l] Moving from CVS to git
Chris Dagdigian
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] [Bug 2867] Bio.PDB.PDBList.update_pdb calls invalid os.cmd
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2544] Bio.GenBank and SeqFeature improvements
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2833] Features insertion on previous bioentry_id
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2853] Support the "in" keyword with Seq + SeqRecord objects / define __contains__ method
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2865] Phd writer class for SeqIO
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2891] Jython test_NCBITextParser fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2895] Bio.Restriction.Restriction_Dictionary Jython Error Fix+Patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2893] Jython test_prosite fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2892] Jython MatrixInfo.py fix+patch
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] how to determine BioPython version number
Mike Williams
- [Biopython-dev] how to determine BioPython version number
Peter
- [Biopython-dev] how to determine BioPython version number
Mike Williams
- [Biopython-dev] [Bug 2904] New: Interface for Novoalign
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2904] Interface for Novoalign
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2905] New: Short read alignment format
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2907] New: When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2907] When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2907] When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2907] When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] [Bug 2907] When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'
bugzilla-daemon at portal.open-bio.org
- [Biopython-dev] Command line wrappers for assembly tools
Peter
- [Biopython-dev] Bio.SubstMat (was: Re: Calculating motif scores)
Michiel de Hoon
- [Biopython-dev] Bio.SubstMat (was: Re: Calculating motif scores)
Bartek Wilczynski
- [Biopython-dev] Bio.SubstMat (was: Re: Calculating motif scores)
Peter
- [Biopython-dev] Moving from CVS to git
Bartek Wilczynski
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Moving from CVS to git
Peter
- [Biopython-dev] Fwd: More FASTQ examples for cross project testing
Peter
- [Biopython-dev] [Biopython] Filtering SeqRecord feature list / nested SeqFeatures
Peter
- [Biopython-dev] OBO2OWL parser / converter
Ed Cannon
- [Biopython-dev] RNA module contributions
Kristian Rother
- [Biopython-dev] OBO2OWL parser / converter
Hilmar Lapp
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] [Biopython] Filtering SeqRecord feature list / nested SeqFeatures
Brad Chapman
- [Biopython-dev] Command line wrappers for assembly tools
Brad Chapman
- [Biopython-dev] Command line wrappers for assembly tools
Peter
- [Biopython-dev] [Biopython] Filtering SeqRecord feature list / nested SeqFeatures
Peter
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Brad Chapman
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
- [Biopython-dev] Fw: Re: RNA module contributions
Michiel de Hoon
- [Biopython-dev] Indexing (large) sequence files with Bio.SeqIO
Peter
Last message date:
Mon Aug 31 17:44:44 UTC 2009
Archived on: Mon Jun 16 03:55:20 UTC 2014
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