[Biopython-dev] [Bug 2907] When a genomic record has been loaded using eFetch, if it is written to genbank format the header line refers to 'aa'

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2907





------- Comment #4 from david.wyllie at ndm.ox.ac.uk  2009-08-25 06:09 EST -------
thank you - this is indeed fixed in the latest git version.
Best wishes
David

(In reply to comment #3)
> Hi David,
> 
> I spotted this (aa/bp mix up in the LOCUS line) after the beta was out, and it
> should already be fixed in Biopython 1.51 final. Please update and retest, and
> if there is still a problem please reopen this bug. Thanks!
> 
> Note that unless I was going to modify the annotation (which the background use
> case suggests you are), I would save the raw GenBank record from Entrez
> directly to disk (since parsing it and then writing it back out with SeqIO
> isn't yet perfect - e.g. the date in the LOCUS line).
> 
> Peter
> 


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