March 2008 Archives by thread

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Starting: Mon Mar 3 12:31:11 EST 2008
Ending: Mon Mar 31 19:58:44 EDT 2008
Messages: 178

• [Bioperl-l] problem with Bio::Tools::EMBOSS   ANJAN PURKAYASTHA
  • [Bioperl-l] problem with Bio::Tools::EMBOSS   Chris Fields
  • [Bioperl-l] problem with Bio::Tools::EMBOSS   Mauricio Herrera Cuadra
    • [Bioperl-l] problem with Bio::Tools::EMBOSS   ANJAN PURKAYASTHA
      • [Bioperl-l] problem with Bio::Tools::EMBOSS   Dave Messina
      • [Bioperl-l] problem with Bio::Tools::EMBOSS   ANJAN PURKAYASTHA
  • [Bioperl-l] problem with Bio::Tools::EMBOSS   Dave Messina
    • [Bioperl-l] problem with Bio::Tools::EMBOSS   Chris Fields
• [Bioperl-l] Bio::TreeIO rises error "Weak references are not implemented in the version of perl"   Daniel Gerlach
  • [Bioperl-l] Bio::TreeIO rises error "Weak references are not implemented in the version of perl"   Sendu Bala
• [Bioperl-l] Bio/SearchIO/Writer/GbrowseGFF.pm   Alexie Papanicolaou
  • [Bioperl-l] Bio/SearchIO/Writer/GbrowseGFF.pm   Chris Fields
  • [Bioperl-l] Bio/SearchIO/Writer/GbrowseGFF.pm   Hilmar Lapp
• [Bioperl-l] Gbrowse.pm followup   Alexie Papanicolaou
• [Bioperl-l] Remove columns containing more than 75% gaps in an alignment   Daniel Gerlach
  • [Bioperl-l] Remove columns containing more than 75% gaps in an alignment   Sendu Bala
• [Bioperl-l] branch length score - total length of the spanning subtree   Daniel Gerlach
  • [Bioperl-l] branch length score - total length of the spanning subtree   Sendu Bala
    • [Bioperl-l] branch length score - total length of the spanning subtree   Hilmar Lapp
      • [Bioperl-l] branch length score - total length of the spanning subtree   Sendu Bala
    • [Bioperl-l] branch length score - total length of the spanning subtree   Daniel Gerlach
• [Bioperl-l] OBDA, Bio::DB::Flat, and bioperl   Chris Fields
  • [Bioperl-l] OBDA, Bio::DB::Flat, and bioperl   Brian Osborne
• [Bioperl-l] SeqIO   Staffa, Nick (NIH/NIEHS)
  • [Bioperl-l] SeqIO   Brian Osborne
  • [Bioperl-l] SeqIO   Chris Fields
    • [Bioperl-l] SeqIO   Jason Stajich
      • [Bioperl-l] SeqIO   Staffa, Nick (NIH/NIEHS)
      • [Bioperl-l] SeqIO   Chris Fields
      • [Bioperl-l] SeqIO   Heikki Lehvaslaiho
      • [Bioperl-l] SeqIO   Staffa, Nick (NIH/NIEHS)
      • [Bioperl-l] SeqIO   Marc Logghe
      • [Bioperl-l] SeqIO   Staffa, Nick (NIH/NIEHS)
      • [Bioperl-l] SeqIO   Marc Logghe
    • [Bioperl-l] SeqIO   Brian Osborne
• [Bioperl-l] SeqIO   Chris Fields
• [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Edward Wijaya
  • [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Sendu Bala
    • [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Sean Davis
      • [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Sendu Bala
      • [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Stefan Kirov
      • [Bioperl-l] BioPerl Module to Parse Transfac Flat File Database   Cook, Malcolm
• [Bioperl-l] failure of add_seqfeature   Masa Masa
  • [Bioperl-l] failure of add_seqfeature   Dave Messina
  • [Bioperl-l] failure of add_seqfeature   Hilmar Lapp
• [Bioperl-l] anonymous cvs?   Scott Cain
  • [Bioperl-l] anonymous cvs?   Scott Cain
  • [Bioperl-l] anonymous cvs?   Jay Hannah
    • [Bioperl-l] anonymous cvs?   Scott Cain
  • [Bioperl-l] anonymous cvs?   William Spooner
  • [Bioperl-l] anonymous cvs?   Chris Fields
    • [Bioperl-l] anonymous cvs?   Scott Cain
      • [Bioperl-l] anonymous cvs?   Chris Fields
      • [Bioperl-l] anonymous cvs?   Chris Fields
• [Bioperl-l] Nightly build archives now available   Chris Fields
  • [Bioperl-l] Nightly build archives now available   Dave Messina
    • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Nathan S. Haigh
      • [Bioperl-l] Nightly build archives now available   Nathan S Haigh
  • [Bioperl-l] Nightly build archives now available   Hilmar Lapp
  • [Bioperl-l] Nightly build archives now available   Scott Cain
    • [Bioperl-l] Nightly build archives now available   Chris Fields
      • [Bioperl-l] Nightly build archives now available   Scott Cain
      • [Bioperl-l] Nightly build archives now available   Sendu Bala
      • [Bioperl-l] Nightly build archives now available   Scott Cain
• [Bioperl-l] BioSQL V1.0.0 released   Heikki Lehvaslaiho
  • [Bioperl-l] BioSQL V1.0.0 released   Chris Fields
    • [Bioperl-l] BioSQL V1.0.0 released   Steve Chervitz
      • [Bioperl-l] BioSQL V1.0.0 released   snoze pa
      • [Bioperl-l] BioSQL V1.0.0 released   Hilmar Lapp
• [Bioperl-l] Reciprocal blast   Matt
  • [Bioperl-l] Reciprocal blast   Dave Messina
    • [Bioperl-l] Reciprocal blast   Jay Hannah
      • [Bioperl-l] Reciprocal blast   Jay Hannah
  • [Bioperl-l] Reciprocal blast   Amir Karger
• [Bioperl-l] Bio::Ontology::OntologyI   Naama Menda
• [Bioperl-l] Bio::Ontology::OntologyI   Hilmar Lapp
• [Bioperl-l] Bio::Ontology::OntologyI   Naama Menda
• [Bioperl-l] Bio::Ontology::OntologyI   Hilmar Lapp
  • [Bioperl-l] Bio::Ontology::OntologyI   Naama Menda
• [Bioperl-l] Bio::Ontology::OntologyI   Hilmar Lapp
  • [Bioperl-l] Bio::Ontology::OntologyI   Naama Menda
    • [Bioperl-l] Bio::Ontology::OntologyI   Hilmar Lapp
• [Bioperl-l] Reciprocal best blast hits / Orthology   Christopher Larsen
• [Bioperl-l] Bio::TreeIO - tree object to string   Daniel Gerlach
  • [Bioperl-l] Bio::TreeIO - tree object to string   Kevin Brown
  • [Bioperl-l] Bio::TreeIO - tree object to string   Sendu Bala
• [Bioperl-l] how to get unigene-cluster with bio-db   stephan.rosecker
  • [Bioperl-l] how to get unigene-cluster with bio-db   Hilmar Lapp
• [Bioperl-l] time-consuming bp_load_seqdatabase.pl   stephan.rosecker
  • [Bioperl-l] time-consuming bp_load_seqdatabase.pl   Hilmar Lapp
• [Bioperl-l] problem with SearchIO and writer   Diego Mauricio Ria–ño Pachó—n
• [Bioperl-l] problem with SearchIO and writer   diriano at uni-potsdam.de
• [Bioperl-l] problem with SearchIO and writer   diriano at uni-potsdam.de
• [Bioperl-l] HOWTO:Trees module   Victoria Lyn Uhlhorn
  • [Bioperl-l] HOWTO:Trees module   Sendu Bala
• [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Hilmar Lapp
  • [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Peter
• [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Hilmar Lapp
  • [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Mark Schreiber
    • [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Chris Fields
      • [Bioperl-l] [BioSQL-l] Loading sequences with novel NCBI taxon id   Mark Schreiber
• [Bioperl-l] bioperl basics   Hilmar Lapp
• [Bioperl-l] Are all recommended modules equally important ?   Charles Plessy
  • [Bioperl-l] Are all recommended modules equally important ?   Dave Messina
    • [Bioperl-l] Are all recommended modules equally important ?   Hilmar Lapp
      • [Bioperl-l] Are all recommended modules equally important ?   Sendu Bala
      • [Bioperl-l] Are all recommended modules equally important ?   Charles Plessy
• [Bioperl-l] bioperl email list   mrphysh at juno.com
  • [Bioperl-l] bioperl email list   Dave Messina
• [Bioperl-l] Priorities for a bioperl-1.6 release   Sendu Bala
  • [Bioperl-l] Priorities for a bioperl-1.6 release   aaron.j.mackey at gsk.com
    • [Bioperl-l] Priorities for a bioperl-1.6 release   Sendu Bala
  • [Bioperl-l] Priorities for a bioperl-1.6 release   Alex Lancaster
  • [Bioperl-l] Priorities for a bioperl-1.6 release   Chris Fields
• [Bioperl-l] BOSC 2008 Announcement and Call For Submissions   darin.london at duke.edu
• [Bioperl-l] NCBI taxonomy database   snoze pa
  • [Bioperl-l] NCBI taxonomy database   Dave Messina
• [Bioperl-l] Using Bioperl book   Jorge.DUARTE at biogemma.com
  • [Bioperl-l] Using Bioperl book   Scott Markel
  • [Bioperl-l] Using Bioperl book   Jason Stajich
    • [Bioperl-l] Using Bioperl book   Chris Fields
• [Bioperl-l] how to go from AlignIO to Variation ?   Jorge.DUARTE at biogemma.com
  • [Bioperl-l] how to go from AlignIO to Variation ?   Albert Vilella
• [Bioperl-l] Bio::DB::GenBank module   Hongyu Zhang
  • [Bioperl-l] Bio::DB::GenBank module   Dave Messina
• [Bioperl-l] bug in Bio::SeqIO::fastq or Bio::Seq::SeqWithQuality?   Joseph Fass
  • [Bioperl-l] bug in Bio::SeqIO::fastq or Bio::Seq::SeqWithQuality?   Dave Messina
• [Bioperl-l] [BioSQL-l] postgres 8.3 will not cast text to integer any longer   Hilmar Lapp
• [Bioperl-l] [BioSQL-l] postgres 8.3 will not cast text to integer any longer   Erik
  • [Bioperl-l] postgres 8.3 will not cast text to integer any longer   Hilmar Lapp
    • [Bioperl-l] [BioSQL-l] postgres 8.3 will not cast text to integer any longer   Greg Sabino Mullane
      • [Bioperl-l] [BioSQL-l] postgres 8.3 will not cast text to integer any longer   Hilmar Lapp
      • [Bioperl-l] [BioSQL-l] postgres 8.3 will not cast text to integer any longer   Greg Sabino Mullane
• [Bioperl-l] postgres 8.3 will not cast text to integer any longer   Erik
  • [Bioperl-l] postgres 8.3 will not cast text to integer any longer   Hilmar Lapp
• [Bioperl-l] SearchIO Performance   Albion Baucom
  • [Bioperl-l] SearchIO Performance   Jason Stajich
    • [Bioperl-l] SearchIO Performance   Sendu Bala
• [Bioperl-l] [BioSQL-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Erik
  • [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Hilmar Lapp
  • [Bioperl-l] [BioSQL-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Hilmar Lapp
• [Bioperl-l] Call for Student Applications - NESCent participates in the Google Summer of Code   Hilmar Lapp
• [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Erik
  • [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Hilmar Lapp
• [Bioperl-l] these objects are pretty cool   mrphysh at juno.com
  • [Bioperl-l] these objects are pretty cool   Jason Stajich
    • [Bioperl-l] these objects are pretty cool   Robson Francisco de Souza
• [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Erik
  • [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Hilmar Lapp
• [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Erik
  • [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Hilmar Lapp
• [Bioperl-l] HitTableWriter error   Steve Chervitz
• [Bioperl-l] postgres 8.3 - load_seqdatabase.pl / swissprot   Erik
• [Bioperl-l] File concatenation   MathGon
• [Bioperl-l] Bioinformatician wanted   Smithies, Russell
• [Bioperl-l] Bio::Search::HSP::GenericHSP::seq_inds   Marc Logghe
  • [Bioperl-l] Bio::Search::HSP::GenericHSP::seq_inds   Sendu Bala
    • [Bioperl-l] Bio::Search::HSP::GenericHSP::seq_inds   Marc Logghe
      • [Bioperl-l] Bio::Search::HSP::GenericHSP::seq_inds   Chris Fields
  • [Bioperl-l] Bio::Search::HSP::GenericHSP::seq_inds   Chris Fields
• [Bioperl-l] Gene Id converts.   Jinyan Huang
  • [Bioperl-l] Gene Id converts.   Chris Fields
• [Bioperl-l] Bio::SeqIO - Error in ID value collection   Damien Pradel
  • [Bioperl-l] Bio::SeqIO - Error in ID value collection   Chris Fields
• [Bioperl-l] Very basic implementation of GenBank XML SeqIO module   Ryan Golhar
  • [Bioperl-l] Very basic implementation of GenBank XML SeqIO module   Chris Fields

Last message date: Mon Mar 31 19:58:44 EDT 2008
Archived on: Wed Apr 2 08:29:27 EDT 2008

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