[Biopython] problem with Bio.Align _aligns.c

[Francesco Gastaldello (Staff)]

Hi all,


I have a virtual environment with python 2.7.15rc1 and I get this error when I run some commands:


////

Python 2.7.15rc1 (default, Apr 15 2018, 21:51:34)
[GCC 7.3.0] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from Bio import SeqIO
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "Bio/SeqIO/__init__.py", line 375, in <module>
    from Bio.Align import MultipleSeqAlignment
  File "Bio/Align/__init__.py", line 22, in <module>
    from Bio.Align import _aligners
ImportError: cannot import name _aligners

////


I've made sure to run "python setup.py build" before trying anything but that did not solve the problem.

I'm on Ububtu 18.04 on a virtual machine.


Thanks,

Francesco

The University of Dundee is a registered Scottish Charity, No: SC015096
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mailman.open-bio.org/pipermail/biopython/attachments/20180626/22d29939/attachment-0001.html>