[Biopython] Planning Biopython 1.72

[Wibowo Arindrarto]

Hi Peter, everyone,

It's been a while that the warning exists for SearchIO. I think it can
be lifted for the next release as I don't expect any major changes to
the API anytime soon.

The index_db() PR also seems like a good inclusion for the next release.

Cheers,
Bow
On Mon, Jun 4, 2018 at 2:13 PM Peter Cock <p.j.a.cock at googlemail.com> wrote:
>
> Dear Biopythoneers,
>
> I am hoping we can release Biopython 1.72 in the next
> week or two - mainly so I can include this work in the
> Biopython Project Update talk at GCCBOSC 2018:
>
> https://gccbosc2018.sched.com/
>
> To that end, are there any outstanding issues or pending
> pull requests which we ought to address now? e.g. these
> seem worth including:
>
> https://github.com/biopython/biopython/pull/1655
> New pairwise alignment module
>
> https://github.com/biopython/biopython/pull/1509
> Add translate method to Bio.SeqFeature
>
> https://github.com/biopython/biopython/pull/1619
> Preserve on-disk order in SeqIO & SearchIO indexes
> (Does anyone want to try benchmarking the changes?)
>
> Bow - can we remove the experimental warning from
> Bio.SearchIO now?
>
> Thanks,
>
> Peter
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