[Biopython] Planning Biopython 1.72

Peter Cock p.j.a.cock at googlemail.com
Mon Jun 4 12:01:56 UTC 2018


Dear Biopythoneers,

I am hoping we can release Biopython 1.72 in the next
week or two - mainly so I can include this work in the
Biopython Project Update talk at GCCBOSC 2018:

https://gccbosc2018.sched.com/

To that end, are there any outstanding issues or pending
pull requests which we ought to address now? e.g. these
seem worth including:

https://github.com/biopython/biopython/pull/1655
New pairwise alignment module

https://github.com/biopython/biopython/pull/1509
Add translate method to Bio.SeqFeature

https://github.com/biopython/biopython/pull/1619
Preserve on-disk order in SeqIO & SearchIO indexes
(Does anyone want to try benchmarking the changes?)

Bow - can we remove the experimental warning from
Bio.SearchIO now?

Thanks,

Peter


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