[BioPython] Problems parsing proteins
Bonis Sanz, Julio
JBonis at imim.es
Thu May 6 05:12:19 EDT 2004
Hi all!,
I am trying to get some info about proteins from NCBI. This is a very simple
example:
#######################
from Bio import GenBank
rParser = GenBank.FeatureParser()
rDict = GenBank.NCBIDictionary(database='proteins'),parser = rParser)
rDict[4503383]
#######################
but it returns this error:
Traceback (most recent call last):
File "<interactive input>", line 1, in ?
File "c:\apache2\python\Lib\site-packages\Bio\GenBank\__init__.py", line
1574, in __getitem__
raise KeyError, "I unexpectedly got back html-formatted data."
KeyError: I unexpectedly got back html-formatted data.
I can not find a solution, maybe NCBI has change its formats?...
If somebody can help!!!!!
Julio Bonis Sanz MD
http://www.juliobonis.com/portal/
Biomedical Informatics Laboratory
Group of Research in Biomedical Informatics (GRIB) http://www.imim.es/grib/
Municipal Institute of Medical Research (IMIM) http://www.imim.es/
Barcelona - Spain
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