[BioPython] Fasta class
Sylvain Schüpp
syl_schupp at yahoo.fr
Tue Jun 15 12:06:57 EDT 2004
Hi,
I tried to make a little program using Biopython. So I open a new window a typed :
from Bio import Fasta
I save and execute my file :
Traceback (most recent call last):
File "H:/SylSch/learn biopython/test.py", line 11, in -toplevel-
from Bio import Fasta
File "C:\sschupp\Python23\Lib\site-packages\Bio\Fasta\__init__.py",
line 23, in -toplevel-
from Bio.Mindy import SimpleSeqRecord
File
"C:\sschupp\Python23\Lib\site-packages\Bio\Mindy\SimpleSeqRecord.py",
line 16, in -toplevel-
from Bio.builders.SeqRecord.sequence import BuildSeqRecord
File
"C:\sschupp\Python23\Lib\site-packages\Bio\builders\SeqRecord\sequence.py",
line 3, in -toplevel-
from Martel import Dispatch
File "C:\sschupp\Python23\Lib\site-packages\Martel\__init__.py", line
6, in -toplevel-
import Expression
File "C:\sschupp\Python23\Lib\site-ackages\Martel\Expression.py",
line 31, in -toplevel-
import Parser
File "C:\sschupp\Python23\Lib\site-packages\Martel\Parser.py", line
33, in -toplevel-
import TextTools
ImportError: No module named TextTools
So I can't work with Fasta librairy. But, in the shell, the same command work very well and in my file, a different (like from Bio import Blast) work also.
I don't understand anything.
Pour suivre mes aventures suédoises :
www.marschupp.fr.st
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