[BioPython] Parsing NCBI_Standalone Blast according to release

Jeffrey Chang jchang@smi.stanford.edu
Tue, 28 May 2002 11:03:26 -0700


On Tuesday, May 28, 2002, at 08:23  AM, Aidan Budd wrote:

> does anyone know if there is a way of getting from biopython a blast
> parser to go with a particular version of blast? e.g. I know I'm using
> blast 2.2.2 Dec-14-2001 release, so I go and get appropriate biopython
> blast modules?  Or is the best solution to go and get the blast version
> that fits with the current biopython modules (if so, is there 
> somewhere I
> should look to find which blast the current biopython modules work 
> with?)

The best thing to do is to try the most recent biopython modules, out of 
the CVS tree, from http://cvs.biopython.org/.  If that doesn't work with 
your blast version, then please send in a bug report -- the fixes are 
usually pretty minor, and we'd like to keep our parser up to date!

Jeff