[Biopython-dev] Hmmer API

[Jason A. Hackney]

Hi Glen,

I would also be willing to have a look at any code you've got so far. 
I've done a bit of Hmmer stuff in the past, so I'd be interested in 
seeing what you've got going.

Cheers,

Jason

On Apr 12, 2005, at 2:10 AM, Glen van Ginkel wrote:

> This is a desperate-ish plea to any biopython developer.
>
>
>
> Recently submitted an explanation of code that interacts with the Hmmer
> (Eddy 2003) suite of programs to the list. I am required to write up a
> project concerning this Hmmer API and would hugely appreciate it if 
> ANY of
> the developers could give me some feed-back. Bearing in mind that this 
> is in
> your spare time, I'm not asking for a major commentary. The focus of 
> the
> project was to produce something that might be accepted as part of the
> BioPython project. What I'm looking for is just a sort of "yeah 
> probably
> will be accepted but.." or "No! you've got a long way to go before we 
> accept
> that gubbins, but.".
>
>
>
> I would really appreciate ANY response
>
>
>
> In anticipation
>
>
>
> Glen van Ginkel
>
>
>
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>
Jason A. Hackney
Postdoctoral Scholar
Department of Microbiology and Immunology
Stanford University