[Bioperl-l] Bio::AnnotatableI function annotation()

Chris Fields cjfields at illinois.edu
Fri Mar 27 15:15:48 EDT 2009


On Mar 27, 2009, at 2:02 PM, Chris Fields wrote:

> Right now SeqFeatureI doesn't inherit AnnotatableI, even though the  
> note about the deprecated *_tag_* methods imply that it does.  We  
> should probably add back the abstract (unimplemented) tag methods to  
> Bio::SeqFeatureI and either remove them from Bio::AnnotatableI or  
> activate the deprecation (they have no place with annotations).   
> This shouldn't hurt things (FLW).

...and just noticed they've been changed already in 1.6 (insert foot  
into mouth).  I'll remove the extraneous deprecation notices at the  
bottom of SeqFeatureI, they're no longer relevant.

-c


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