[EMBOSS] ORF selection with EMBOSS

[Hervé Ménager]

Hi Jon,

That's exactly what would make me happy. Assuming it makes it easier for 
you if I formulate officially this request, where do I need to send the 
request?

Hervé

On 12/06/2011 12:00 PM, Jon Ison wrote:
> Hi Hervé
>
> Nothing in EMBOSS so far as I'm aware, but if all you want is for checktrans to report the longest
> ORF then that should be an easy enough option to add.
>
> Cheers
>
> Jon
>
>
>> Hi,
>> I have been using transeq and checktrans to find ORFs in DNA sequences.
>> I have an question regarding the selection of the ORFs in case
>> checktrans finds multiple ones in the result of transeq: I would like to
>> select the longest one automatically (assuming it is the correct one).
>> Is there any existing tool in EMBOSS (or alternatively in any Bio*
>> library) that does this job?
>> Cheers,
>> Hervé
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>> EMBOSS at lists.open-bio.org
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>>
>
>