[Biopython] Biopython 1.83 released

[Peter Cock]

Dear Biopythoneers,

Our first release of 2024 is now out, sooner than planned as this is purely
to revert the removal of the .strand, .ref, and .ref_db attributes of the
SeqFeature which was done in Biopython 1.82 without a deprecation period.
They are again aliases for .location.strand etc, but trigger deprecation
warnings. See https://biopython.org/wiki/Deprecation_policy

We apologize for any inconvenience and thank you to those reporting this.

This release of Biopython supports Python 3.8, 3.9, 3.10, 3.11 and 3.12. It
has also been tested on PyPy3.9 v7.3.13. Python 3.8 is approaching end of
life, our support for it is now deprecated.

The source code tar-ball and pre-compiled wheels for the major platforms
are all live on PyPI:

https://pypi.org/project/biopython/

We would expect the release to be on conda-forge shortly too.

Happy New Year!

Peter

--

For reference, the checksum are as follows:

$ md5sum biopython-1.83*
9bf7983d9844353766d7cc43b83ba5e2
biopython-1.83-cp310-cp310-macosx_10_9_x86_64.whl
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biopython-1.83-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
0fa1219ddefcd516778c2d1e0a010a50 biopython-1.83-cp310-cp310-win32.whl
6b0ba4b7ac995731ec616c6bc98dd7ee biopython-1.83-cp310-cp310-win_amd64.whl
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biopython-1.83-cp311-cp311-macosx_10_9_x86_64.whl
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biopython-1.83-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
8f61939eac588e457f870d309092f760 biopython-1.83-cp311-cp311-win32.whl
962d154b9437605273297fb593a7cbe5 biopython-1.83-cp311-cp311-win_amd64.whl
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biopython-1.83-cp312-cp312-macosx_10_9_x86_64.whl
cc49935b2317d894474249de5aaeb4eb
biopython-1.83-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
612eed5554a3fb5a58196fc3539f04a5 biopython-1.83-cp312-cp312-win32.whl
b8aa5639bde4b3b75bcdd6ded18f04b6 biopython-1.83-cp312-cp312-win_amd64.whl
2efc998e0d2c629636fd453a256a7bfa biopython-1.83-cp38-cp38-macosx_10_9_x86_64.whl
a4d8e6df63843daff3027da154501160
biopython-1.83-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
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biopython-1.83-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
07e9962f1be1cadc050b204622d07252 biopython-1.83-cp38-cp38-win32.whl
a65395082ae4fc7a165a563e827d7498 biopython-1.83-cp38-cp38-win_amd64.whl
c425167a0dacd159c3324dd61afcdace biopython-1.83-cp39-cp39-macosx_10_9_x86_64.whl
55c44a9e0ed0aea84089466aad59323d
biopython-1.83-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
11a188e0724470eb4698801d5ca0958a biopython-1.83-cp39-cp39-win32.whl
cc26d8a1f03428b241121c59e9b80b12 biopython-1.83-cp39-cp39-win_amd64.whl
fa95c92de7cfbb153b070e3da5aaf14a biopython-1.83.tar.gz
1861c9e138837fa1d452665cc6c9c20b biopython-1.83.zip

$ shasum -a 256 biopython-1.83*
e2cc737906d8de47eedbc4476f711b960c16a65daa8cdd021875398c81999a09
biopython-1.83-cp310-cp310-macosx_10_9_x86_64.whl
2df408be9816dd98c28fe181ea93fb6e0d375bf1763ad9ed503ac30bb2df5b1a
biopython-1.83-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
a0c1c70789c7e2a26563db5ba533fb9fea0cc1f2c7bc7ad240146cb223ba44a3
biopython-1.83-cp310-cp310-win32.whl
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biopython-1.83-cp310-cp310-win_amd64.whl
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biopython-1.83-cp311-cp311-macosx_10_9_x86_64.whl
c756c0b81702c705141c87c2805203df01c6d4cf290e8cefd48cbc61a3c85b82
biopython-1.83-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
0496f2a6e6e060d8ff0f34784ad15ed342b10cfe282020efe168286f0c14c479
biopython-1.83-cp311-cp311-win32.whl
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biopython-1.83-cp311-cp311-win_amd64.whl
0d5ce14755a6b49dea4743cf6929570afe5becb66ad222194984c7bf04218f86
biopython-1.83-cp312-cp312-macosx_10_9_x86_64.whl
0b35aa095de0fa8339b70664797d0e83322a1a9d512e2fd52d4e872df5189f56
biopython-1.83-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
118425a210cb3d184c7a78154c5646089366faf124cd46c6056ca7f9302b94ad
biopython-1.83-cp312-cp312-win32.whl
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biopython-1.83-cp312-cp312-win_amd64.whl
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biopython-1.83-cp38-cp38-macosx_10_9_x86_64.whl
fd9bc6fef3f6a10043635a75e1a77c9dce877375140e81059c67c73d4ce65c4c
biopython-1.83-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
2c3584122a5daca25b3914a32c52785b051c11518cd5e111e9e89ee04a6234fe
biopython-1.83-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl
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biopython-1.83-cp38-cp38-win32.whl
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biopython-1.83-cp38-cp38-win_amd64.whl
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biopython-1.83-cp39-cp39-macosx_10_9_x86_64.whl
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biopython-1.83-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
e914f7161b3831d7c58db33cc5c7ca64b42c9877c5a776a8313e7a5fd494f8de
biopython-1.83-cp39-cp39-win32.whl
aae1b156a76907c2abfe9d141776b0aead65695ea914eaecdf12bd1e8991f869
biopython-1.83-cp39-cp39-win_amd64.whl
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biopython-1.83.tar.gz
39c4c48dc23bed0f2cc582802d5ce18272cafd5ddb7c693ff0d08cb943c2372d
biopython-1.83.zip