[Biopython] Blast query

[Aisling O'Driscoll]

Hi,

I have a query re BLAST output. I have written a BioPython script that takes the attached betl gene sequence and runs a blast. It returns results for Listeria monocytogenes WSLC1001 complete genome with gi|584465821|gb|CP007160.1.

I run the same from the NCBI web interface just to verify the output and it also returns this result.

However why is it that it does not return the correct match of Listeria monocytogenes EGD-e chromosome with gi|16802048:2172068-2173591 as we can see at the top of the attached fasta file?

Thanks in advance
Aisling.
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