[Biopython] Using Phylo to draw trees with images in nodes

[Jaime Huerta Cepas]

Hi Jaime,
your question led me to write this post explaining a workaround solution
for the problem of Qt dependencies in ETE:

https://phylohack.wordpress.com/2014/11/01/a-portable-version-of-the-ete-toolkit/

hope it helps!
jaime


2014-10-17 17:42 GMT+02:00 Jaime Tovar <jmtc21 at bath.ac.uk>:

> Linux, x64.
>
> Thanks,
>
> Jaime.
>
>
> On 17/10/2014 16:40, Chris Friedline wrote:
>
>> What OS?
>>
>> --
>> Christopher J. Friedline, Ph.D.
>> NSF Postdoctoral Research Fellow
>> Virginia Commonwealth University
>> Richmond, VA 23284
>> http://chris.friedline.net
>>
>>
>>
>>
>>  On Oct 17, 2014, at 11:09 AM, Jaime Tovar <jmtc21 at bath.ac.uk> wrote:
>>>
>>> Hi Chris,
>>>
>>> Yes, I want to limit everything to be pip installable... and PyQt4 is
>>> not cooperating. Seems there is no workaround for that one. But I'm open
>>> to suggestions :)
>>>
>>> Thanks!
>>>
>>> Jaime.
>>>
>>> On 17/10/14 15:26, Chris Friedline wrote:
>>>
>>>> Hi Jaime,
>>>>
>>>> ETE2 is probably the way you want to go here. What problems with
>>>> dependencies are you having?  Qt?
>>>>
>>>> Chris
>>>>
>>>> --
>>>> Christopher J. Friedline, Ph.D.
>>>> NSF Postdoctoral Research Fellow
>>>> Virginia Commonwealth University
>>>> Richmond, VA 23284
>>>> http://chris.friedline.net
>>>>
>>>>
>>>>
>>>>
>>>>  On Oct 17, 2014, at 9:05 AM, Jaime Tovar <jmtc21 at bath.ac.uk> wrote:
>>>>>
>>>>> Hi all,
>>>>>
>>>>> Sorry, seems my google fu is low today. Have been trying to find
>>>>> information about a way to add small images next to the species names in
>>>>> trees generated with Biopython/Phylo. But I'm not even sure it is possible.
>>>>> I want to do something in the likes of trees produced with ETE2. I can't
>>>>> use ETE2 because of problems with the dependencies :(.
>>>>>
>>>>> Thanks in advance for any help!
>>>>>
>>>>> Jaime.
>>>>> _______________________________________________
>>>>> Biopython mailing list  -  Biopython at mailman.open-bio.org
>>>>> http://mailman.open-bio.org/mailman/listinfo/biopython
>>>>>
>>>>
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