[Biopython] Digital gene expression

[Michiel de Hoon]

Hi everybody,

EdgeR and DESeq are popular R packages to analyze differential expression in digital gene expression methodologies such as RNAseq and CAGE. Is something similar to these R packages available in Python (or is anybody working on such a module for Biopython)? Not that I don't like EdgeR / DESeq, but I'd prefer something in Python so that I can understand what I am doing.

Thanks,
-Michiel.