[Biopython] Biopython and Snow Leopard

[Paulo Nuin]

Just another perspective from Snow Leopard install, I didn't have any  
errors compiling BioPython, after I installed the latest version of  
Xcode (including 10.4 support). All tests were fine too.

Paulo


On 2009-09-09, at 12:35 PM, Peter wrote:

> On Wed, Sep 9, 2009 at 5:26 PM, Kelly F  
> Oakeson<kelly.oakeson at utah.edu> wrote:
>> Peter,
>> I only ran the setup.py test, but here are the results:
>> $ python setup.py test
>> running test
>> test_Ace ... ok
>> test_AlignIO ... ok
>> test_BioSQL ... skipping. Enter your settings in Tests/ 
>> setup_BioSQL.py
>> (not important if you do not plan to use BioSQL).
>> test_BioSQL_SeqIO ... skipping. Enter your settings in Tests/
>> setup_BioSQL.py (not important if you do not plan to use BioSQL).
>> test_CAPS ... ok
>> test_Clustalw ... ok
>> test_Clustalw_tool ... skipping. Install clustalw or clustalw2 if you
>> want to use Bio.Clustalw.
>> test_Cluster ... skipping. If you want to use Bio.Cluster, install
>> NumPy first and then reinstall Biopython
>> ...
>> Bio.Wise.psw docstring test ... ok
>> Bio.Motif docstring test ... ok
>> ----------------------------------------------------------------------
>> Ran 124 tests in 62.858 seconds
>
> Excellent - a clean bill of health.
>
> Do you want to try installing NumPy now, and then reinstalling
> Biopython to see if everything works? ;)
>
> Peter
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