[Biopython] CompareAce parser

Bartek Wilczynski bartek at rezolwenta.eu.org
Sat Dec 5 19:58:41 EST 2009


Hi,

I don't have anything against deprecating, even though I don't the
advantages of doing so. (the module is trivial, but so is the output
of compareACE: a number giving a score between motifs. The score,
however is not trivial and I wouldn't want to reimplement it.)

cheers
  Bartek

On Sat, Dec 5, 2009 at 4:59 PM, Michiel de Hoon <mjldehoon at yahoo.com> wrote:
> Hi everybody,
>
> In Bio.Motif, there is a nominal parser for CompareAce files. However, this parser has almost no functionality. Would anybody mind if we deprecate this module for the next release? Whereas we usually might declare the module obsolete before deprecating it, in this case I think we can deprecate it straightaway since currently this parser does very little.
>
> --Michiel.
>
>
>
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-- 
Bartek Wilczynski
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