[BioPython] Module for ace assembly format

[Peter Cock]

On Tue, Mar 25, 2008 at 2:23 PM, Bruno Santos <bsantos at biocant.pt> wrote:
> Hi,
>
>  I'm currently working in an assembly project and I need to read some files
>  in ace assembly format, my question is if biopython have any module to do
>  this. I have done a search in google and I found some references to a
>  bioperl module, but in the biopython website I didn't find any information
>  about this format.

Hi Bruno,

Have a look at the Bio.Sequencing.Ace module for ACE files output by
PHRAP.  We don't seem to have anything in the main tutorial on this,
so if you would like to write a short piece for the "cookbook" chapter
that would be helpful

Peter