[BioPython] Bio.SeqFeature.SeqFeature

Cedar McKay cmckay at u.washington.edu
Wed Aug 6 00:36:39 UTC 2008


Hello. I just upgraded from 1.44 to 1.47 and one of my home-brew  
classes stopped working. This used to work:

class BetterSeqFeature(Bio.SeqFeature.SeqFeature, fastaTools):
	"""Extends the Bio.SeqFeature.SeqFeature class with several new  
methods and attributes.
	The Bio.SeqFeature.SeqFeature represents individual features of a  
genbank record,
	for example a CDS."""


But now after the upgrade to 1.47 my script throws this:

  File "/usr/local/python/Rocap.py", line 740, in <module>
     class BetterSeqFeature(Bio.SeqFeature.SeqFeature, fastaTools):
AttributeError: 'module' object has no attribute 'SeqFeature'


FYI fastaTools is a class of my own.

I looked at the changelog, and don't see anything obvious. Can anyone  
give me a pointer as to why this stopped working?

best,
Cedar




More information about the Biopython mailing list