RE : [BioPython] Parse bit score with NCBIXML module from BLAST output
Michiel De Hoon
mdehoon at c2b2.columbia.edu
Thu Dec 22 07:38:08 EST 2005
> I checked the 1.41 version of Bio.Blast.NCBIXML.BlastParser() and could
> not find any evidence for parsing of the <Hsp_bit-score> tag. Any solution?
If this is a recent addition to Blast reports, it may not have existed at the
time NCBIXML.BlastParser was written. Can you write a patch to
NCBIXML.BlastParser?
--Michiel.
Michiel de Hoon
Center for Computational Biology and Bioinformatics
Columbia University
1150 St Nicholas Avenue
New York, NY 10032
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