[BioPython] EUtils testing
Cary Miller
Cary.Miller@uchsc.edu
Sun, 12 Jan 2003 14:44:39 -0700 (MST)
Hi Andrew,
While testing EUtils I got this traceback.
======================================================================
ERROR: test4 (__main__.TestEUtilsELinkExamples)
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Traceback (most recent call last):
File "test_examples.py", line 272, in test4
related = records.neighbor_links(term = "medline[sb]")
File "/usr/local/lib/python2.2/site-packages/EUtils/Mixins.py", line 66,
in neighbor_links
daterange = daterange)
File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py",
line 114, in elink
return self.eutils.elink_using_dbids(
File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py",
line 124, in _get_dbids
infile = self.efetch(retmode = "text", rettype = "uilist")
File "/usr/local/lib/python2.2/site-packages/EUtils/DBIdsClient.py",
line 164, in efetch
rettype = rettype)
File "/usr/local/lib/python2.2/site-packages/EUtils/ThinClient.py", line
988, in efetch_using_dbids
query = {"id": id_string,
File "/usr/local/lib/python2.2/site-packages/EUtils/ThinClient.py", line
648, in _get
return self.opener.open(url)
File "support_test.py", line 22, in open
saved_url, saved_query = self.unpickler.load()
ValueError: too many values to unpack
The only thing the bottom two seem to have in common is the name 'open'.
Is this some kind of name collision?
//=\ Cary Miller //=\
\=// Center for Computational Pharmacology \=//
//=\ University of Colorado Health Sciences Center //=\
\=// http://compbio.uchsc.edu/Hunter_lab/Miller \=//
//=\ (303) 315-1584 //=\