[Biopython-dev] Code quality with Quantified code

Tiago Rodrigues Antao tra at popgen.net
Fri Dec 4 19:47:13 UTC 2015


Hi,

We now have a better URL for this:

https://www.quantifiedcode.com/app/project/gh:biopython:biopython


On Thu, 3 Dec 2015 09:55:27 -0700
Tiago Rodrigues Antao <tra at popgen.net> wrote:

> Hi,
> 
> Whenever there is a commit, QuantifiedCode sends an email to the
> person setting up the repository on QC with the new problems. Would
> there be an interest to have this sent to this list directly?
> 
> Here is what I received:
> https://www.quantifiedcode.com/app/project/554b34dfff644b75b9f647aeab1d6461/diff/a46eaf3d615d97f541a779901b4cb2e736afc12d/b23936d0f224d2c34256f68a69fb6172bd6e5824/issues
> 
> On Thu, 3 Dec 2015 13:54:25 +0000
> Peter Cock <p.j.a.cock at googlemail.com> wrote:
> 
> > On Thu, Dec 3, 2015 at 12:27 PM, Carlos Pena <mycalesis at gmail.com>
> > wrote:
> > > I can see the page and list of bugs without the need to log in. I
> > > am using Chrome in Linux.
> > 
> > This seems to be an incompatibility with Apple Safari and the
> > Quantified Code website. Firefox seems to work for me :)
> > 
> > https://www.quantifiedcode.com/app/project/554b34dfff644b75b9f647aeab1d6461
> > 
> > And looking at the top fault, I have to agree this if statement in
> > bgzf.py needs looking at (I forget now why I wrote it this way):
> > 
> > https://github.com/biopython/biopython/commit/7d4523d6bbd2fa59c798c40ced38f5976ce64fa9#diff-8f35ada1444d6f77e41c86b649ba88ecR539
> > 
> > Peter
> 
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> Biopython-dev at mailman.open-bio.org
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