[Biopython-dev] Biopython update talk at BOSC 2014

[Tiago Antao]

Hi,

1. Shouldn't Peter be the first author on the list?

2. We have 2 containers:
   1. a container with all (almost) the dependencies, which can be used
   to deploy biopython on the fly (for normal usage):
https://github.com/tiagoantao/my-containers/blob/master/biopython/Biopython
   2. A buildbot test container (that is in used for builbot testing):
https://github.com/tiagoantao/my-containers/blob/master/biopython/Biopython-Test

3. My address: Vector Biology Department, Liverpool School of Tropical
Medicine, Pembroke Place, Liverpool, United Kingdom

On Wed, 2 Apr 2014 11:52:07 +0200
Wibowo Arindrarto <w.arindrarto at gmail.com> wrote:

> Hello everyone,
> 
> I've finished the first draft of our update (attached). Please let me
> know if there are additions / deletions you would like me to make
> before I submit the abstract.
> 
> Also, some things I would like to note:
> 
> * I am missing the formal affiliations of everybody in the authors
> list except for me and Peter. Could you please send me your most
> recent affiliation?
> 
> * I'm not sure about whether to include Tiago's recent Biopython
> docker container (I think it would be nice). Tiago, do we have the
> container up and running for our tests?
> 
> Cheers,
> Bow
> 
> On Tue, Apr 1, 2014 at 11:37 PM, Peter Cock
> <p.j.a.cock at googlemail.com> wrote:
> > On Mon, Mar 31, 2014 at 10:08 PM, Wibowo Arindrarto
> > <w.arindrarto at gmail.com> wrote:
> >> Hi Peter, everyone,
> >>
> >> A LaTeX template would be great :). I'm still preparing the
> >> abstract, should be ready for everyone to check soon.
> >>
> >> Cheers,
> >> Bow
> >
> > LaTeX template sent.
> >
> > I will be travelling the next few days and may be largely out of
> > email contact - so if you don't hear from me, don't worry and
> > submit the abstract anyway. I'm confident the others will have
> > good advice and suggestions (and I'm not the only one who
> > does email list moderation - but it might be simpler to send
> > round plain text and a link to the PDF if you want to show it
> > and not worry about the attachment triggering moderation).
> >
> > As usual this will get reviewed by the BOSC panel, and you'll
> > have a chance to revise the abstract at that point - for the
> > project updates is it OK if the initial text has a couple of details
> > "to be confirmed", like a summary of the forthcoming release
> > Biopython 1.64 (time for another thread, maybe we can aim
> > for the end of this month?).
> >
> > Thanks Bow,
> >
> > Peter