[Biopython-dev] [PATCH] Various NACCESS fixes and unit tests

Peter Cock p.j.a.cock at googlemail.com
Mon Nov 25 10:15:08 UTC 2013

Hi Gokcen,

This looks very promising - would you be happy to submit this patch
as a pull request on GitHub?



P.S. Thanks for this report & fix:

On Mon, Nov 25, 2013 at 12:23 AM, Gökcen Eraslan
<gokcen.eraslan at gmail.com> wrote:
> Hello,
> I am developing a machine learning project which is using some command line
> tools such as NACCESS, STRIDE, netsurfp. I have decided to use BioPython and
> started digging NACCESS and DSSP codes in Bio/PDB to learn more about how to
> write parsers for BioPython.
> I have made some minor changes to NACCESS code and prepared some unit test
> files. Patch is attached. It would be nice to push this to master branch.
> I am also writing parsers for STRIDE and netsurfp tools and I would like to
> send those when I finish writing.
> Regards.
> --
> Gokcen Eraslan
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> Biopython-dev at lists.open-bio.org
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