April 2012 Archives by thread

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Starting: Sun Apr 1 19:13:56 UTC 2012
Ending: Mon Apr 30 10:57:27 UTC 2012
Messages: 106

• [Biopython-dev] GSoC genomic variant proposal   Brad Chapman
  • [Biopython-dev] GSoC genomic variant proposal   Lenna Peterson
    • [Biopython-dev] GSoC genomic variant proposal   Brad Chapman
      • [Biopython-dev] GSoC genomic variant proposal   Lenna Peterson
      • [Biopython-dev] GSoC genomic variant proposal   Brad Chapman
      • [Biopython-dev] GSoC genomic variant proposal   Lenna Peterson
• [Biopython-dev] GSoC Student Applicant   Brad Chapman
  • [Biopython-dev] GSoC Student Applicant   Wibowo Arindrarto
    • [Biopython-dev] GSoC Student Applicant   Peter Cock
• [Biopython-dev] MAF Parser/Indexer   Brad Chapman
  • [Biopython-dev] MAF Parser/Indexer   Peter Cock
    • [Biopython-dev] MAF Parser/Indexer   Andrew Sczesnak
  • [Biopython-dev] MAF Parser/Indexer   Andrew Sczesnak
    • [Biopython-dev] MAF Parser/Indexer   Brad Chapman
• [Biopython-dev] [Biopython - Feature #3336] (New) Make Phylo.draw more customizable   redmine at redmine.open-bio.org
• [Biopython-dev] GSoC SearchIO project   Peter Cock
  • [Biopython-dev] GSoC SearchIO project   Michiel de Hoon
    • [Biopython-dev] GSoC SearchIO project   Peter Cock
• [Biopython-dev] [Biopython - Bug #3337] (New) 'Bio.trie.trie' is not picklable   redmine at redmine.open-bio.org
• [Biopython-dev] SeqIO circular   Matthias Bernt
  • [Biopython-dev] SeqIO circular   Matthias Bernt
    • [Biopython-dev] SeqIO circular   Matthias Bernt
• [Biopython-dev] Enhancements to Phylo.draw; pyplot best practices   Eric Talevich
  • [Biopython-dev] Enhancements to Phylo.draw; pyplot best practices   Eric Talevich
    • [Biopython-dev] Enhancements to Phylo.draw; pyplot best practices   Peter Cock
      • [Biopython-dev] Enhancements to Phylo.draw; pyplot best practices   Eric Talevich
      • [Biopython-dev] Enhancements to Phylo.draw; pyplot best practices   Peter Cock
• [Biopython-dev] GSoC SearchIO project   Michiel de Hoon
  • [Biopython-dev] GSoC SearchIO project   Eric Talevich
    • [Biopython-dev] GSoC SearchIO project   Michiel de Hoon
      • [Biopython-dev] GSoC SearchIO project   Brad Chapman
• [Biopython-dev] [Biopython - Feature #3338] (New) Convert a protein alignment and nucleotide sequences to codon alignment   redmine at redmine.open-bio.org
• [Biopython-dev] Sphinx documentation online ?   Laurent Gautier
  • [Biopython-dev] Sphinx documentation online ?   Eric Talevich
    • [Biopython-dev] Sphinx documentation online ?   Laurent Gautier
• [Biopython-dev] Method to weight sequences in an alignment   Eric Talevich
  • [Biopython-dev] Bio.Cluster.Tree -> Bio.Phylo   Andrew Sczesnak
    • [Biopython-dev] Bio.Cluster.Tree -> Bio.Phylo   Eric Talevich
      • [Biopython-dev] Bio.Cluster.Tree -> Bio.Phylo   Andrew Sczesnak
      • [Biopython-dev] Bio.Cluster.Tree -> Bio.Phylo   Eric Talevich
      • [Biopython-dev] Bio.Cluster.Tree -> Bio.Phylo   Andrew Sczesnak
• [Biopython-dev] [Biopython - Bug #3340] (New) Example using Bio.Clustalw in Tutorial   redmine at redmine.open-bio.org
• [Biopython-dev] BOSC 2012 - Biopython Update   Peter Cock
  • [Biopython-dev] BOSC 2012 - Biopython Update   Eric Talevich
    • [Biopython-dev] BOSC 2012 - Biopython Update   Brad Chapman
    • [Biopython-dev] BOSC 2012 - Biopython Update   Peter Cock
      • [Biopython-dev] BOSC 2012 - Biopython Update   Eric Talevich
      • [Biopython-dev] BOSC 2012 - Biopython Update   Peter Cock
      • [Biopython-dev] BOSC 2012 - Biopython Update   Eric Talevich
      • [Biopython-dev] BOSC 2012 - Biopython Update   Peter Cock
      • [Biopython-dev] BOSC 2012 - Biopython Update   João Rodrigues
      • [Biopython-dev] BOSC 2012 - Biopython Update   Zhigang Wu
      • [Biopython-dev] BOSC 2012 - Biopython Update   Lenna Peterson
      • [Biopython-dev] BOSC 2012 - Biopython Update   Eric Talevich
      • [Biopython-dev] BOSC 2012 - Biopython Update   Peter Cock
• [Biopython-dev] [Biopython - Feature #3341] (New) Improve SffIO to parse 3 extra lines present in some SFF files ("Run Name:, Analysis Name:, Full Path:)"   redmine at redmine.open-bio.org
• [Biopython-dev] [biopython] Fix flex library dependency of MMCIFlex; closes 2619 (#31)   Lenna Peterson
  • [Biopython-dev] [biopython] Fix flex library dependency of MMCIFlex; closes 2619 (#31)   Peter Cock
• [Biopython-dev] plink phasing and others   Tiago Antão
  • [Biopython-dev] plink phasing and others   Peter Cock
    • [Biopython-dev] plink phasing and others   Tiago Antão
  • [Biopython-dev] plink phasing and others   Tiago Antão
    • [Biopython-dev] plink phasing and others   Peter Cock
      • [Biopython-dev] plink phasing and others   Tiago Antão
      • [Biopython-dev] plink phasing and others   Peter Cock
• [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Peter Cock
  • [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Kevin Jacobs <jacobs at bioinformed.com>
  • [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Andrew Sczesnak
    • [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Peter Cock
      • [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Andrew Sczesnak
• [Biopython-dev] [Biopython - Bug #3333] PhyloXML writer fails to include is_aligned attribute with mol_seq elements   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #3333] (Closed) PhyloXML writer fails to include is_aligned attribute with mol_seq elements   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Feature #3342] (New) Phylo.root_with_outgroup: set the length of the outgroup branch   redmine at redmine.open-bio.org
• [Biopython-dev] Fwd: Feature: Python implementation of MMCIF parser (#33)   Peter Cock
  • [Biopython-dev] Fwd: Feature: Python implementation of MMCIF parser (#33)   Lenna Peterson
    • [Biopython-dev] [biopython] Feature: Python implementation of MMCIF parser (#33)   Peter Cock
    • [Biopython-dev] Fwd: Feature: Python implementation of MMCIF parser (#33)   Eric Talevich
      • [Biopython-dev] Fwd: Feature: Python implementation of MMCIF parser (#33)   Peter Cock
• [Biopython-dev] [Biopython - Bug #2619] (Closed) Bio.PDB.MMCIFParser component MMCIFlex commented out in setup.py   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #2626] Bio.PDB mmCIFParser parse exceptions   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #2950] Bio.PDBIO.save writes MODEL records without model id   redmine at redmine.open-bio.org
• [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Lenna Peterson
  • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Peter Cock
    • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Eric Talevich
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Lenna Peterson
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Lenna Peterson
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Eric Talevich
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Lenna Peterson
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   João Rodrigues
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   Eric Talevich
      • [Biopython-dev] pull request: Handle MMCIF with multiple models (closes 2943)   João Rodrigues
• [Biopython-dev] [Biopython - Bug #2950] Bio.PDBIO.save writes MODEL records without model id   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #2951] (Closed) PDBParser assigns model 0 to first model no matter what...   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #2950] (Closed) Bio.PDBIO.save writes MODEL records without model id   redmine at redmine.open-bio.org
• [Biopython-dev] pull request: Bio.SCOP.Raf chem dict updater   Lenna Peterson
• [Biopython-dev] [Biopython - Bug #2943] (Closed) MMCIFParser only handling a single model.   redmine at redmine.open-bio.org
• [Biopython-dev] BGZF support, was Re: Biopython 1.60 plans and beyond   Peter Cock
• [Biopython-dev] [Biopython - Feature #3344] (New) Bio.PDB.Entity classes need a __contains__ method   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #3169] (Closed) to_one_letter_code in Bio.SCOP.Raf is old   redmine at redmine.open-bio.org
• [Biopython-dev] [Biopython - Bug #3346] (New) patch for legacy parser to support BLASTX 2.2.25+   redmine at redmine.open-bio.org
• [Biopython-dev] Google Summer of Code Project: SearchIO in Biopython   Wibowo Arindrarto
  • [Biopython-dev] [Biopython] Google Summer of Code Project: SearchIO in Biopython   Peter Cock
    • [Biopython-dev] [Biopython] Google Summer of Code Project: SearchIO in Biopython   Wibowo Arindrarto
      • [Biopython-dev] [Biopython] Google Summer of Code Project: SearchIO in Biopython   Peter Cock
      • [Biopython-dev] [Biopython] Google Summer of Code Project: SearchIO in Biopython   Wibowo Arindrarto
      • [Biopython-dev] [Biopython] Google Summer of Code Project: SearchIO in Biopython   Peter Cock

Last message date: Mon Apr 30 10:57:27 UTC 2012
Archived on: Mon Jun 16 03:55:41 UTC 2014

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