[Biopython-dev] Tested Fixup branch for Bio.PDB

Eric Talevich eric.talevich at gmail.com
Wed Jun 9 23:56:35 UTC 2010

On Tue, Jun 8, 2010 at 5:59 AM, Kristian Rother <krother at rubor.de> wrote:

> Hi Eric,
> I've checked out your pdbfixes branch and ran our 431 Unit Tests of
> ModeRNA with it. There were no changes to the master Bio.PDB branch -->
> for us everything OK.
> Details:
> ModeRNA (http://www.genesilico.pl/moderna) engineers RNA 3D structures and
> uses Bio.PDB for most of its operations: reading files,
> adding/copying/manipulating residues/atoms, superimposing structures,
> searching neighbors by KDTree, writing files.
> Right, the tests most probably did not depend directly on the code you
> changed, but as I understand you wanted to go sure the branch didnt break
> anything by accident.

Thanks, Kristian! I didn't expect the patches to break anything, but it's
hard to be sure until someone else has tried it.

I've pushed the pdbfixes branch to Biopython's master branch on GitHub.


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