[Biopython-dev] [Bug 2806] Possible deadlock (hang) in Bio.Application using subprocess wait()

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Jun 3 16:29:18 UTC 2009


http://bugzilla.open-bio.org/show_bug.cgi?id=2806


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED




------- Comment #2 from biopython-bugzilla at maubp.freeserve.co.uk  2009-06-03 12:29 EST -------
Since this bug was filed, the Bio.Application.generic_run function is now used
in test_Emboss.py and the new alignment tool wrapper unit tests.  None of these
have shown a deadlock problem, but I have applied this fix anyway as a
precaution.

See Bio/Application/__init__.py revision 1.21 in CVS.

Marking as fixed.


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