[Biopython-dev] [Bug 2896] BLAST XML parser: stripped leading/trailing spaces in Hsp_midline

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2896





------- Comment #5 from biopython-bugzilla at maubp.freeserve.co.uk  2009-08-05 09:27 EST -------
Created an attachment (id=1357)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=1357&action=view)
Updated version of NCBIXML.py as in CVS revision 1.23

(In reply to comment #4)
> Hi Peter,
> 
> could you please attach the file?

Sure.

> The latest version of NCBIXML.py I get from cvs at code.open-bio.org
> still seems to be from April 2009. When I try to specify revision
> 1.23 I get a checkout warning and no file. Or is there a testing
> branch for this? 

Using code.open-bio.org (or its various aliases like cvs.biopython.org)
actually gives you access to a read only mirror of the real CVS data,
which is on dev.open-bio.org (for use by those with commit rights).

I'm not sure exactly how often the public mirror is updated, but I would
guess hourly. I would guess if you try again later it would work, but
in the meantime I have attached the new file to this bug.

Peter


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