[Biopython-dev] [Bug 2815] Bio.Application command line interfaces

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2815





------- Comment #17 from cymon.cox at gmail.com  2009-04-28 13:55 EST -------
(In reply to comment #16)
> (In reply to comment #15)
> > 
> > Yeah - use something like that, but be aware that the tests shouldn't assume
> > that the executable name is just "muscle".  Hopefully test_Muscle_tool.py does
> > this right...
> > 
> 
> Well, it does now.  I've got test_Muscle_tool.py to run on Windows, assuming
> the user chooses to put MUSCLE under the program files directory in a
> reasonably predictable folder.  Given the MUSCLE installation process on
> Windows is entirely manual, we can't really do anything else.
> 

OK, pushed to applic-int updated unittest for PRANK, MAFFT, and DIALIGN -
skipping tests on windows.

Also changed the names to test_XXXX_tool.py

C.


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