[Biopython-dev] [Bug 2480] Local BLAST fails: Spaces in Windows file-path values

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon May 19 13:46:22 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2480


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
           Severity|blocker                     |major




------- Comment #12 from biopython-bugzilla at maubp.freeserve.co.uk  2008-05-19 09:46 EST -------
I see from comment 11 that some nasty quote escaping may be needed (which could
be an NCBI bug).

Have you been able to try using relative paths at the command line (avoiding
spaces ideally)?

Unfortunately my Windows machine is currently without internet access, which is
one reason why I haven't made time to sit down and explore this issue.

P.S. I don't think this is a critical bug in Biopython, although I do take your
point that it your setup this is a big issue.  Downgrading this to severity
"major".


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