[Biopython-dev] KDTree to numpy

Peter biopython at maubp.freeserve.co.uk
Sun Feb 17 11:05:51 UTC 2008

On Feb 17, 2008 7:58 AM, Marcin Cieślik <marcin.cieslik at gmail.com> wrote:
> Hi,
> I was able to make KDtrees work with numpy. There where no real problems
> apart from my complete lack of c++/swig skills. It seems to me that
> everything is working fine.
> the includes in KDTree.i look like this:
> %{
>         #include "KDTree.h"
>         #include
> </usr/lib/python2.5/site-packages/numpy/core/include/numpy/arrayobject.h>
> %}
> is this correct? Changes in .py files where really small.

This looks very similar to the change in the patch on bug 2255 except
Ed used a relative path.


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