[Biopython-dev] [Bug 2480] Local BLAST fails: Spaces in Windows file-path values

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2480





------- Comment #3 from mdehoon at ims.u-tokyo.ac.jp  2008-04-04 04:37 EST -------
Please try

my_blast_exe = r'"C:\Documents and Settings\patnaik\My
Documents\blast\bin\blastall.exe"'

(note the extra " in the command).
If it works, an easy solution would be to add the " to
Bio/Blast/NCBIStandalone.py before calling os.popen3.


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