[Biopython-dev] [Bug 2480] Local BLAST fails: Spaces in Windows file-path values

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2480





------- Comment #2 from drpatnaik at yahoo.com  2008-04-04 02:15 EST -------
(In reply to comment #1)

I do not see any error/warning notice in the command console.

The reason that I suspect something is wrong is that the Blast results output
file I get using the code below doesn't have any content (empty file):

[snip -- code same as that in previous post]
output_results = result_handle.read()
save_file = open(r"C:/Documents and Settings/patnaik/My
Documents/blast/bin/my_blast_output", "w")
save_file.write(output_results)
save_file.close()

To capture any error, I used the code I mention in my first post. And that is
where I find "'C:\Documents' is not recognized as an internal or external
command, operable program or batch file."


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