[Biopython-dev] [Bug 2382] Generic Roche or GSFlex "FASTA" parser

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2382





------- Comment #11 from jflatow at northwestern.edu  2007-10-17 11:20 EST -------
That sounds very reasonable to me to put all this stuff in a separate module. I
would like to implement the design we have been discussing, and I will name it
whatever you think is appropriate, but I would like to do it the way that seems
*right* to me. I mean by that building off of streams of

>header
data
...

since I think this pattern could eventually be used to actually clean up the
rest of the FASTA stuff, not make it worse. I also believe there could
potentially be other instances when a more general FASTA parser would be
useful, even if we don't know of them yet. How does this sound?


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