[Biopython-dev] [Bug 2366] Ambiguous nucleotides in (Reverse)complement functions in Bio.Seq

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http://bugzilla.open-bio.org/show_bug.cgi?id=2366





------- Comment #4 from biopython-bugzilla at maubp.freeserve.co.uk  2007-10-15 10:16 EST -------
Thanks for that Tiago,

I guess we should file a bug on Bio.Nexus on the alphabet issue; It may be that
it should create a copy or subclass of the ambiguous DNA alphabet in order to
include "?" (I imagine that Nexus uses this rather than "N"), and see if it is
using the Gapped() alphabet system or not.

Did you have any comments on this patch for (reverse) complements?


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