[Biopython-dev] [Bug 2390] Error importing Swiss Prot in BioSQL

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2390


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|REOPENED                    |RESOLVED
         Resolution|                            |FIXED




------- Comment #22 from biopython-bugzilla at maubp.freeserve.co.uk  2007-12-14 10:17 EST -------
Thanks for the details.  Those fields are not being recorded in the SeqRecord
object, so there is no way for BioSQL to put them into the database.  This is
bug 2235, which is on my mental to do list.

Additionally, even if the parser did record the Taxon in the SeqRecord, BioSQL
currently don't record this in the database.  That seems to have been a short
term fix for Bug 1921 which we should probably revisit.

Note I'm re-marking THIS bug as fixed.  Peter.


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