[Biopython-dev] [Bug 1942] GenBank RecordParser fails on particular qualifier structure

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Feb 9 08:59:49 EST 2006


lpritc at scri.sari.ac.uk changed:

           What    |Removed                     |Added
                 CC|                            |lpritc at scri.sari.ac.uk
             Status|RESOLVED                    |REOPENED
         Resolution|DUPLICATE                   |

------- Comment #3 from lpritc at scri.sari.ac.uk  2006-02-09 08:59 -------
The updated CVS code from February 8th falls over on the note qualifier of the
following record from NC_007633.gbk

     CDS             391217..391771
                     /note="Similar non-mycoplasma proteins have and additional

                     120 amino acids at the COOH end; identified by similarity
                     to SP:P54575; match to protein family HMM PF06574"
                     /product="riboflavin kinase (flavokinase) domain protein"

Deleting the extra \n in the record resolves the problem.

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