[Biopython-dev] [Bug 1531] Bio.Fasta.RecordParser, SequenceParser

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Oct 8 22:15:53 EDT 2003


jchang at biopython.org changed:

           What    |Removed                     |Added
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED

------- Additional Comments From jchang at biopython.org  2003-10-08 22:15 -------
The RecordParser and SequenceParser classes are not meant to be applied to files containing 
multiple sequences.  They should be applied to the sequences individually.  

Files of sequences should be handled with the Iterator, and one of those classes passed as a the 
parser.  However, it is true that the Iterator does not handle spaces between records, or at the 
beginning and end of files.  I have fixed it so that now blank lines are ignored.

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