[Biopython-dev] Re: Biopython release To-Do

[Michael Hoffman]

On Tue, 3 Dec 2002, Jeffrey Chang wrote:

> On Tue, Dec 03, 2002 at 01:53:29PM -0600, Michael Hoffman wrote:
>
> > [Bio.GFF requires] having MySQLdb installed (not in the README
> > either--should I update it?).
> 
> Awesome!  Yep, update away.

I also updated it for psycopg.

$ cvs diff -u -r 1.37 -r 1.38 README 
Index: README
===================================================================
RCS file: /home/repository/biopython/biopython/README,v
retrieving revision 1.37
retrieving revision 1.38
diff -u -r1.37 -r1.38
--- README	2002/12/03 04:12:55	1.37
+++ README	2002/12/03 20:58:06	1.38
@@ -42,7 +42,11 @@
   of chromosomes.  If you do not need this functoinality, you will not
   need to install this package.
 
+o psycopg:http://initd.org/software/psycopg/ (optional)
+  This package is only used by BioSQL to access a PostgreSQL database.
 
+o MySQLdb:http://sourceforge.net/projects/mysql-python (optional)
+  This package is only used by Bio.GFF to access a MySQL database.
 
 These version numbers indicate the earliest tested versions.  Later
 versions of these packages may work as well.
===================================================================

Please let me know if there are further problems.
-- 
Michael Hoffman <grouse at mail.utexas.edu>
The University of Texas at Austin