[Bioperl-l] An error in the SYNOPSIS of Bio::FeatureIO::bed
Brian Osborne
bosborne11 at verizon.net
Tue Mar 12 11:04:36 EDT 2013
Yichao,
Fixed. Thank you for pointing that out.
Brian O.
On Mar 7, 2013, at 5:52 PM, yichao li <liyc1989 at gmail.com> wrote:
> Hi,
>
> In the SYSNOPSIS, it says:
>
> my $in =* Bio::FeatureIO(-format => 'bed', -file => 'file.bed');*
> for my $feat ($in->next_feature) {
> # do something with $feat (a Bio::SeqFeature::Annotated object)
> }
>
> my $out = Bio::FeatureIO(-format=>'bed');
> for my $feat ($seq->get_seqFeatures) {
> $out->write_feature($feat);
> }
>
> Actually, it should be *Bio::FeatureIO->new(-format => 'bed', -file =>
> 'file.bed');*
>
> If not, an error will occur.
>
>
> ------------------------------------
> Best wishes,
> Yichao
> Ohio University Bioinformatics Lab
> Phone: (740)-591-1289
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l
More information about the Bioperl-l
mailing list