[Bioperl-l] An error in the SYNOPSIS of Bio::FeatureIO::bed
yichao li
liyc1989 at gmail.com
Thu Mar 7 17:52:18 EST 2013
Hi,
In the SYSNOPSIS, it says:
my $in =* Bio::FeatureIO(-format => 'bed', -file => 'file.bed');*
for my $feat ($in->next_feature) {
# do something with $feat (a Bio::SeqFeature::Annotated object)
}
my $out = Bio::FeatureIO(-format=>'bed');
for my $feat ($seq->get_seqFeatures) {
$out->write_feature($feat);
}
Actually, it should be *Bio::FeatureIO->new(-format => 'bed', -file =>
'file.bed');*
If not, an error will occur.
------------------------------------
Best wishes,
Yichao
Ohio University Bioinformatics Lab
Phone: (740)-591-1289
More information about the Bioperl-l
mailing list